eF-site ID 6bdo-CD PDB Code 6bdo Chain C, D click to enlarge Title Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with a quinone inhibitor HQNO at 2.8A resolution Classification OXIDOREDUCTASE/INHIBITOR Compound FAD-dependent pyridine nucleotide-disulfide oxidoreductase Source (F5L3B8_9BACI) Sequence C:  KPSIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYH YITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVV AIDREQQKVTLQNGELHYDYLVVGLGSEPETFGIEGLREH AFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGG AGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPT VLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVI EVDGEEEEIKAATVVWTGGVRGNSIVEKSGFETMRGRIKV DPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQH GENVAANLAALIRGGSMTPFKPHIRGTVASLGRNDAIGIV GGRKVYGHAASWLKKLIDMRYLYLIGGLSLVLKK D:  KPSIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYH YITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVV AIDREQQKVTLQNGELHYDYLVVGLGSEPETFGIEGLREH AFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGG AGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPT VLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVI EVDGEEEEIKAATVVWTGGVRGNSIVEKSGFETMRGRIKV DPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQH GENVAANLAALIRGGSMTPFKPHIRGTVASLGRNDAIGIV GGRKVYGHAASWLKKLIDMRYLYLIGGLSLVLKKG Description Functional site 1) chain D residue 12 type sequence G description binding site for residue FAD D 601 source : AC4 2) chain D residue 13 type sequence Y description binding site for residue FAD D 601 source : AC4 3) chain D residue 14 type sequence G description binding site for residue FAD D 601 source : AC4 4) chain D residue 37 type sequence N description binding site for residue FAD D 601 source : AC4 5) chain D residue 38 type sequence K description binding site for residue FAD D 601 source : AC4 6) chain D residue 43 type sequence Y description binding site for residue FAD D 601 source : AC4 7) chain D residue 45 type sequence T description binding site for residue FAD D 601 source : AC4 8) chain D residue 46 type sequence T description binding site for residue FAD D 601 source : AC4 9) chain D residue 79 type sequence D description binding site for residue FAD D 601 source : AC4 10) chain D residue 80 type sequence T description binding site for residue FAD D 601 source : AC4 11) chain D residue 81 type sequence V description binding site for residue FAD D 601 source : AC4 12) chain D residue 107 type sequence L description binding site for residue FAD D 601 source : AC4 13) chain D residue 108 type sequence G description binding site for residue FAD D 601 source : AC4 14) chain D residue 126 type sequence I description binding site for residue FAD D 601 source : AC4 15) chain D residue 165 type sequence F description binding site for residue FAD D 601 source : AC4 16) chain D residue 166 type sequence T description binding site for residue FAD D 601 source : AC4 17) chain D residue 265 type sequence N description binding site for residue FAD D 601 source : AC4 18) chain D residue 267 type sequence I description binding site for residue FAD D 601 source : AC4 19) chain D residue 299 type sequence D description binding site for residue FAD D 601 source : AC4 20) chain D residue 314 type sequence P description binding site for residue FAD D 601 source : AC4 21) chain D residue 315 type sequence T description binding site for residue FAD D 601 source : AC4 22) chain D residue 316 type sequence A description binding site for residue FAD D 601 source : AC4 23) chain D residue 317 type sequence Q description binding site for residue FAD D 601 source : AC4 24) chain C residue 10 type sequence G description binding site for residue FAD C 601 source : AC5 25) chain C residue 12 type sequence G description binding site for residue FAD C 601 source : AC5 26) chain C residue 13 type sequence Y description binding site for residue FAD C 601 source : AC5 27) chain C residue 14 type sequence G description binding site for residue FAD C 601 source : AC5 28) chain C residue 37 type sequence N description binding site for residue FAD C 601 source : AC5 29) chain C residue 38 type sequence K description binding site for residue FAD C 601 source : AC5 30) chain C residue 43 type sequence Y description binding site for residue FAD C 601 source : AC5 31) chain C residue 45 type sequence T description binding site for residue FAD C 601 source : AC5 32) chain C residue 46 type sequence T description binding site for residue FAD C 601 source : AC5 33) chain C residue 79 type sequence D description binding site for residue FAD C 601 source : AC5 34) chain C residue 80 type sequence T description binding site for residue FAD C 601 source : AC5 35) chain C residue 81 type sequence V description binding site for residue FAD C 601 source : AC5 36) chain C residue 106 type sequence G description binding site for residue FAD C 601 source : AC5 37) chain C residue 107 type sequence L description binding site for residue FAD C 601 source : AC5 38) chain C residue 108 type sequence G description binding site for residue FAD C 601 source : AC5 39) chain C residue 126 type sequence I description binding site for residue FAD C 601 source : AC5 40) chain C residue 165 type sequence F description binding site for residue FAD C 601 source : AC5 41) chain C residue 166 type sequence T description binding site for residue FAD C 601 source : AC5 42) chain C residue 267 type sequence I description binding site for residue FAD C 601 source : AC5 43) chain C residue 298 type sequence G description binding site for residue FAD C 601 source : AC5 44) chain C residue 299 type sequence D description binding site for residue FAD C 601 source : AC5 45) chain C residue 314 type sequence P description binding site for residue FAD C 601 source : AC5 46) chain C residue 315 type sequence T description binding site for residue FAD C 601 source : AC5 47) chain C residue 316 type sequence A description binding site for residue FAD C 601 source : AC5 48) chain C residue 317 type sequence Q description binding site for residue FAD C 601 source : AC5 49) chain C residue 319 type sequence A description binding site for residue FAD C 601 source : AC5 50) chain C residue 349 type sequence T description binding site for residue FAD C 601 source : AC5 51) chain C residue 376 type sequence K description binding site for residue FAD C 601 source : AC5 52) chain C residue 317 type sequence Q description binding site for residue HQO C 602 source : AC6 53) chain C residue 320 type sequence I description binding site for residue HQO C 602 source : AC6 54) chain C residue 348 type sequence G description binding site for residue HQO C 602 source : AC6 55) chain C residue 349 type sequence T description binding site for residue HQO C 602 source : AC6 56) chain C residue 379 type sequence I description binding site for residue HQO C 602 source : AC6 57) chain C residue 382 type sequence R description binding site for residue HQO C 602 source : AC6

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