eF-site ID 6b55-ABCDEFGHIJKLMNOPQRST
PDB Code 6b55
Chain A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T

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Title Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
Classification ANTIMICROBIAL PROTEIN
Compound Flower-specific defensin
Source (DEF_NICAL)
Sequence A:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
B:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
C:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
D:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
E:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
F:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
G:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
H:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
I:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
J:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
K:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
L:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
M:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
N:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
O:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
P:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
Q:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
R:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
S:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
T:  ARECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain A
residue 35
type
sequence S
description binding site for residue PA8 A 101
source : AC1

2) chain A
residue 37
type
sequence I
description binding site for residue PA8 A 101
source : AC1

3) chain A
residue 38
type
sequence L
description binding site for residue PA8 A 101
source : AC1

4) chain A
residue 40
type
sequence R
description binding site for residue PA8 A 101
source : AC1

5) chain B
residue 4
type
sequence K
description binding site for residue PA8 A 101
source : AC1

6) chain B
residue 33
type
sequence H
description binding site for residue PA8 A 101
source : AC1

7) chain B
residue 36
type
sequence K
description binding site for residue PA8 A 101
source : AC1

8) chain H
residue 36
type
sequence K
description binding site for residue PA8 A 101
source : AC1

9) chain H
residue 39
type
sequence R
description binding site for residue PA8 A 101
source : AC1

10) chain B
residue 35
type
sequence S
description binding site for residue PA8 B 101
source : AC2

11) chain B
residue 36
type
sequence K
description binding site for residue PA8 B 101
source : AC2

12) chain B
residue 37
type
sequence I
description binding site for residue PA8 B 101
source : AC2

13) chain B
residue 38
type
sequence L
description binding site for residue PA8 B 101
source : AC2

14) chain B
residue 40
type
sequence R
description binding site for residue PA8 B 101
source : AC2

15) chain D
residue 36
type
sequence K
description binding site for residue PA8 B 101
source : AC2

16) chain D
residue 39
type
sequence R
description binding site for residue PA8 B 101
source : AC2

17) chain B
residue 36
type
sequence K
description binding site for residue PO4 B 102
source : AC3

18) chain B
residue 39
type
sequence R
description binding site for residue PO4 B 102
source : AC3

19) chain A
residue 36
type
sequence K
description binding site for residue PA8 C 101
source : AC4

20) chain A
residue 39
type
sequence R
description binding site for residue PA8 C 101
source : AC4

21) chain C
residue 35
type
sequence S
description binding site for residue PA8 C 101
source : AC4

22) chain C
residue 37
type
sequence I
description binding site for residue PA8 C 101
source : AC4

23) chain C
residue 38
type
sequence L
description binding site for residue PA8 C 101
source : AC4

24) chain C
residue 40
type
sequence R
description binding site for residue PA8 C 101
source : AC4

25) chain A
residue 37
type
sequence I
description binding site for residue PA8 D 101
source : AC5

26) chain D
residue 35
type
sequence S
description binding site for residue PA8 D 101
source : AC5

27) chain D
residue 36
type
sequence K
description binding site for residue PA8 D 101
source : AC5

28) chain D
residue 37
type
sequence I
description binding site for residue PA8 D 101
source : AC5

29) chain D
residue 38
type
sequence L
description binding site for residue PA8 D 101
source : AC5

30) chain D
residue 40
type
sequence R
description binding site for residue PA8 D 101
source : AC5

31) chain F
residue 36
type
sequence K
description binding site for residue PA8 D 101
source : AC5

32) chain F
residue 37
type
sequence I
description binding site for residue PA8 D 101
source : AC5

33) chain M
residue 13
type
sequence I
description binding site for residue PA8 D 101
source : AC5

34) chain C
residue 13
type
sequence I
description binding site for residue PA8 E 101
source : AC6

35) chain C
residue 36
type
sequence K
description binding site for residue PA8 E 101
source : AC6

36) chain C
residue 37
type
sequence I
description binding site for residue PA8 E 101
source : AC6

37) chain C
residue 39
type
sequence R
description binding site for residue PA8 E 101
source : AC6

38) chain E
residue 35
type
sequence S
description binding site for residue PA8 E 101
source : AC6

39) chain E
residue 37
type
sequence I
description binding site for residue PA8 E 101
source : AC6

40) chain E
residue 38
type
sequence L
description binding site for residue PA8 E 101
source : AC6

41) chain E
residue 40
type
sequence R
description binding site for residue PA8 E 101
source : AC6

42) chain F
residue 37
type
sequence I
description binding site for residue PA8 E 101
source : AC6

43) chain R
residue 15
type
sequence I
description binding site for residue PA8 E 101
source : AC6

44) chain R
residue 38
type
sequence L
description binding site for residue PA8 E 101
source : AC6

45) chain R
residue 39
type
sequence R
description binding site for residue PA8 E 101
source : AC6

46) chain T
residue 13
type
sequence I
description binding site for residue PA8 E 101
source : AC6

47) chain T
residue 38
type
sequence L
description binding site for residue PA8 E 101
source : AC6

48) chain C
residue 17
type
sequence K
description binding site for residue PGE E 102
source : AC7

49) chain C
residue 18
type
sequence P
description binding site for residue PGE E 102
source : AC7

50) chain C
residue 21
type
sequence R
description binding site for residue PGE E 102
source : AC7

51) chain E
residue 5
type
sequence T
description binding site for residue PGE E 102
source : AC7

52) chain E
residue 6
type
sequence E
description binding site for residue PGE E 102
source : AC7

53) chain E
residue 7
type
sequence S
description binding site for residue PGE E 102
source : AC7

54) chain E
residue 8
type
sequence N
description binding site for residue PGE E 102
source : AC7

55) chain F
residue 1
type
sequence R
description binding site for residue PGE E 102
source : AC7

56) chain F
residue 2
type
sequence E
description binding site for residue PGE E 102
source : AC7

57) chain G
residue 35
type
sequence S
description binding site for residue PO4 G 101
source : AC8

58) chain G
residue 36
type
sequence K
description binding site for residue PO4 G 101
source : AC8

59) chain G
residue 37
type
sequence I
description binding site for residue PO4 G 101
source : AC8

60) chain G
residue 38
type
sequence L
description binding site for residue PO4 G 101
source : AC8

61) chain J
residue 36
type
sequence K
description binding site for residue PO4 G 101
source : AC8

62) chain B
residue 36
type
sequence K
description binding site for residue PO4 G 102
source : AC9

63) chain G
residue 40
type
sequence R
description binding site for residue PO4 G 102
source : AC9

64) chain H
residue 35
type
sequence S
description binding site for residue PA8 H 101
source : AD2

65) chain H
residue 37
type
sequence I
description binding site for residue PA8 H 101
source : AD2

66) chain H
residue 38
type
sequence L
description binding site for residue PA8 H 101
source : AD2

67) chain H
residue 40
type
sequence R
description binding site for residue PA8 H 101
source : AD2

68) chain G
residue 36
type
sequence K
description binding site for residue PA8 I 101
source : AD3

69) chain G
residue 37
type
sequence I
description binding site for residue PA8 I 101
source : AD3

70) chain G
residue 39
type
sequence R
description binding site for residue PA8 I 101
source : AD3

71) chain I
residue 35
type
sequence S
description binding site for residue PA8 I 101
source : AD3

72) chain I
residue 37
type
sequence I
description binding site for residue PA8 I 101
source : AD3

73) chain I
residue 38
type
sequence L
description binding site for residue PA8 I 101
source : AD3

74) chain I
residue 40
type
sequence R
description binding site for residue PA8 I 101
source : AD3

75) chain J
residue 37
type
sequence I
description binding site for residue PA8 I 101
source : AD3

76) chain B
residue 37
type
sequence I
description binding site for residue PGE I 102
source : AD4

77) chain I
residue 37
type
sequence I
description binding site for residue PGE I 102
source : AD4

78) chain I
residue 39
type
sequence R
description binding site for residue PGE I 103
source : AD5

79) chain I
residue 37
type
sequence I
description binding site for residue PGE J 101
source : AD6

80) chain L
residue 36
type
sequence K
description binding site for residue PGE J 101
source : AD6

81) chain I
residue 36
type
sequence K
description binding site for residue PA8 L 101
source : AD7

82) chain K
residue 37
type
sequence I
description binding site for residue PA8 L 101
source : AD7

83) chain K
residue 38
type
sequence L
description binding site for residue PA8 L 101
source : AD7

84) chain L
residue 35
type
sequence S
description binding site for residue PA8 L 101
source : AD7

85) chain L
residue 37
type
sequence I
description binding site for residue PA8 L 101
source : AD7

86) chain L
residue 38
type
sequence L
description binding site for residue PA8 L 101
source : AD7

87) chain L
residue 40
type
sequence R
description binding site for residue PA8 L 101
source : AD7

88) chain N
residue 36
type
sequence K
description binding site for residue PA8 L 101
source : AD7

89) chain N
residue 37
type
sequence I
description binding site for residue PA8 L 101
source : AD7

90) chain N
residue 39
type
sequence R
description binding site for residue PA8 L 101
source : AD7

91) chain L
residue 39
type
sequence R
description binding site for residue EDO L 102
source : AD8

92) chain K
residue 36
type
sequence K
description binding site for residue PA8 M 101
source : AD9

93) chain K
residue 37
type
sequence I
description binding site for residue PA8 M 101
source : AD9

94) chain K
residue 39
type
sequence R
description binding site for residue PA8 M 101
source : AD9

95) chain M
residue 35
type
sequence S
description binding site for residue PA8 M 101
source : AD9

96) chain M
residue 37
type
sequence I
description binding site for residue PA8 M 101
source : AD9

97) chain M
residue 38
type
sequence L
description binding site for residue PA8 M 101
source : AD9

98) chain M
residue 40
type
sequence R
description binding site for residue PA8 M 101
source : AD9

99) chain N
residue 37
type
sequence I
description binding site for residue PA8 M 101
source : AD9

100) chain K
residue 15
type
sequence I
description binding site for residue PGE M 102
source : AE1

101) chain M
residue 37
type
sequence I
description binding site for residue PGE M 102
source : AE1

102) chain M
residue 38
type
sequence L
description binding site for residue PGE M 102
source : AE1

103) chain O
residue 2
type
sequence E
description binding site for residue EDO O 101
source : AE2

104) chain O
residue 30
type
sequence T
description binding site for residue EDO O 101
source : AE2

105) chain O
residue 46
type
sequence P
description binding site for residue EDO O 101
source : AE2

106) chain A
residue 13
type
sequence I
description binding site for residue PA8 P 101
source : AE3

107) chain A
residue 15
type
sequence I
description binding site for residue PA8 P 101
source : AE3

108) chain A
residue 39
type
sequence R
description binding site for residue PA8 P 101
source : AE3

109) chain C
residue 37
type
sequence I
description binding site for residue PA8 P 101
source : AE3

110) chain O
residue 37
type
sequence I
description binding site for residue PA8 P 101
source : AE3

111) chain P
residue 35
type
sequence S
description binding site for residue PA8 P 101
source : AE3

112) chain P
residue 37
type
sequence I
description binding site for residue PA8 P 101
source : AE3

113) chain P
residue 38
type
sequence L
description binding site for residue PA8 P 101
source : AE3

114) chain P
residue 40
type
sequence R
description binding site for residue PA8 P 101
source : AE3

115) chain R
residue 36
type
sequence K
description binding site for residue PA8 P 101
source : AE3

116) chain R
residue 37
type
sequence I
description binding site for residue PA8 P 101
source : AE3

117) chain A
residue 38
type
sequence L
description binding site for residue PA8 Q 101
source : AE4

118) chain H
residue 39
type
sequence R
description binding site for residue PA8 Q 101
source : AE4

119) chain J
residue 15
type
sequence I
description binding site for residue PA8 Q 101
source : AE4

120) chain O
residue 36
type
sequence K
description binding site for residue PA8 Q 101
source : AE4

121) chain O
residue 37
type
sequence I
description binding site for residue PA8 Q 101
source : AE4

122) chain O
residue 39
type
sequence R
description binding site for residue PA8 Q 101
source : AE4

123) chain Q
residue 35
type
sequence S
description binding site for residue PA8 Q 101
source : AE4

124) chain Q
residue 37
type
sequence I
description binding site for residue PA8 Q 101
source : AE4

125) chain Q
residue 38
type
sequence L
description binding site for residue PA8 Q 101
source : AE4

126) chain Q
residue 40
type
sequence R
description binding site for residue PA8 Q 101
source : AE4

127) chain Q
residue 21
type
sequence R
description binding site for residue EDO Q 102
source : AE5

128) chain Q
residue 25
type
sequence I
description binding site for residue EDO Q 102
source : AE5

129) chain Q
residue 37
type
sequence I
description binding site for residue PA8 R 101
source : AE6

130) chain R
residue 35
type
sequence S
description binding site for residue PA8 R 101
source : AE6

131) chain R
residue 37
type
sequence I
description binding site for residue PA8 R 101
source : AE6

132) chain R
residue 38
type
sequence L
description binding site for residue PA8 R 101
source : AE6

133) chain R
residue 40
type
sequence R
description binding site for residue PA8 R 101
source : AE6

134) chain T
residue 36
type
sequence K
description binding site for residue PA8 R 101
source : AE6

135) chain T
residue 37
type
sequence I
description binding site for residue PA8 R 101
source : AE6

136) chain T
residue 39
type
sequence R
description binding site for residue PA8 R 101
source : AE6

137) chain J
residue 15
type
sequence I
description binding site for residue PA8 S 101
source : AE7

138) chain Q
residue 36
type
sequence K
description binding site for residue PA8 S 101
source : AE7

139) chain Q
residue 37
type
sequence I
description binding site for residue PA8 S 101
source : AE7

140) chain S
residue 35
type
sequence S
description binding site for residue PA8 S 101
source : AE7

141) chain S
residue 37
type
sequence I
description binding site for residue PA8 S 101
source : AE7

142) chain S
residue 38
type
sequence L
description binding site for residue PA8 S 101
source : AE7

143) chain S
residue 40
type
sequence R
description binding site for residue PA8 S 101
source : AE7

144) chain M
residue 36
type
sequence K
description binding site for residue PA8 T 101
source : AE8

145) chain M
residue 37
type
sequence I
description binding site for residue PA8 T 101
source : AE8

146) chain T
residue 35
type
sequence S
description binding site for residue PA8 T 101
source : AE8

147) chain T
residue 37
type
sequence I
description binding site for residue PA8 T 101
source : AE8

148) chain T
residue 38
type
sequence L
description binding site for residue PA8 T 101
source : AE8

149) chain T
residue 40
type
sequence R
description binding site for residue PA8 T 101
source : AE8

150) chain T
residue 1
type
sequence R
description binding site for residue EDO T 102
source : AE9

151) chain T
residue 2
type
sequence E
description binding site for residue EDO T 102
source : AE9

152) chain T
residue 30
type
sequence T
description binding site for residue EDO T 102
source : AE9

153) chain T
residue 45
type
sequence K
description binding site for residue EDO T 102
source : AE9

154) chain T
residue 46
type
sequence P
description binding site for residue EDO T 102
source : AE9

155) chain A
residue 1-24
type prosite
sequence RECKTESNTFPGICITKPPCRKAC
description GAMMA_THIONIN Gamma-thionins family signature. ReCkteSntFp.GiCitkppCrkaC
source prosite : PS00940


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