eF-site ID 6b1c-ABC
PDB Code 6b1c
Chain A, B, C

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Title Macrophage Migration Inhibitory Factor in complex with a Naphthyridinone Inhibitor (4a)
Classification ISOMERASE/ISOMERASE inhibitor
Compound Macrophage migration inhibitory factor
Source (MIF_HUMAN)
Sequence A:  PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVH
VVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLC
GLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
B:  PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVH
VVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLC
GLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
C:  PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVH
VVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLC
GLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
Description


Functional site

1) chain A
residue 68
type
sequence G
description binding site for residue SO4 A 201
source : AC1

2) chain A
residue 69
type
sequence G
description binding site for residue SO4 A 201
source : AC1

3) chain A
residue 70
type
sequence A
description binding site for residue SO4 A 201
source : AC1

4) chain A
residue 71
type
sequence Q
description binding site for residue SO4 A 201
source : AC1

5) chain A
residue 1
type
sequence P
description binding site for residue C9J A 202
source : AC2

6) chain A
residue 2
type
sequence M
description binding site for residue C9J A 202
source : AC2

7) chain A
residue 32
type
sequence K
description binding site for residue C9J A 202
source : AC2

8) chain A
residue 36
type
sequence Y
description binding site for residue C9J A 202
source : AC2

9) chain A
residue 62
type
sequence H
description binding site for residue C9J A 202
source : AC2

10) chain A
residue 63
type
sequence S
description binding site for residue C9J A 202
source : AC2

11) chain A
residue 64
type
sequence I
description binding site for residue C9J A 202
source : AC2

12) chain A
residue 101
type
sequence M
description binding site for residue C9J A 202
source : AC2

13) chain A
residue 106
type
sequence V
description binding site for residue C9J A 202
source : AC2

14) chain B
residue 92
type
sequence D
description binding site for residue C9J A 202
source : AC2

15) chain C
residue 95
type
sequence Y
description binding site for residue C9J A 202
source : AC2

16) chain C
residue 97
type
sequence N
description binding site for residue C9J A 202
source : AC2

17) chain A
residue 95
type
sequence Y
description binding site for residue C9J B 201
source : AC3

18) chain A
residue 97
type
sequence N
description binding site for residue C9J B 201
source : AC3

19) chain B
residue 1
type
sequence P
description binding site for residue C9J B 201
source : AC3

20) chain B
residue 2
type
sequence M
description binding site for residue C9J B 201
source : AC3

21) chain B
residue 32
type
sequence K
description binding site for residue C9J B 201
source : AC3

22) chain B
residue 36
type
sequence Y
description binding site for residue C9J B 201
source : AC3

23) chain B
residue 62
type
sequence H
description binding site for residue C9J B 201
source : AC3

24) chain B
residue 63
type
sequence S
description binding site for residue C9J B 201
source : AC3

25) chain B
residue 64
type
sequence I
description binding site for residue C9J B 201
source : AC3

26) chain B
residue 101
type
sequence M
description binding site for residue C9J B 201
source : AC3

27) chain B
residue 106
type
sequence V
description binding site for residue C9J B 201
source : AC3

28) chain B
residue 113
type
sequence F
description binding site for residue C9J B 201
source : AC3

29) chain A
residue 77
type
sequence K
description binding site for residue SO4 C 201
source : AC4

30) chain C
residue 16
type
sequence D
description binding site for residue SO4 C 201
source : AC4

31) chain C
residue 17
type
sequence G
description binding site for residue SO4 C 201
source : AC4

32) chain C
residue 18
type
sequence F
description binding site for residue SO4 C 201
source : AC4

33) chain C
residue 19
type
sequence L
description binding site for residue SO4 C 201
source : AC4

34) chain C
residue 20
type
sequence S
description binding site for residue SO4 C 201
source : AC4

35) chain C
residue 68
type
sequence G
description binding site for residue SO4 C 202
source : AC5

36) chain C
residue 69
type
sequence G
description binding site for residue SO4 C 202
source : AC5

37) chain C
residue 70
type
sequence A
description binding site for residue SO4 C 202
source : AC5

38) chain C
residue 71
type
sequence Q
description binding site for residue SO4 C 202
source : AC5

39) chain A
residue 73
type
sequence R
description binding site for residue SO4 C 203
source : AC6

40) chain C
residue 15
type
sequence P
description binding site for residue SO4 C 203
source : AC6

41) chain C
residue 16
type
sequence D
description binding site for residue SO4 C 203
source : AC6

42) chain A
residue 1
type ACT_SITE
sequence P
description Proton acceptor; via imino nitrogen => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI1

43) chain B
residue 1
type ACT_SITE
sequence P
description Proton acceptor; via imino nitrogen => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI1

44) chain C
residue 1
type ACT_SITE
sequence P
description Proton acceptor; via imino nitrogen => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI1

45) chain A
residue 54-68
type prosite
sequence EPCALCSLHSIGKIG
description MIF Macrophage migration inhibitory factor family signature. EPCAlcsLhSIGkIG
source prosite : PS01158

46) chain A
residue 32
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 64
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

48) chain A
residue 97
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 32
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

50) chain B
residue 64
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

51) chain B
residue 97
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

52) chain C
residue 32
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

53) chain C
residue 64
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

54) chain C
residue 97
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:11170644, ECO:0000269|PubMed:17526494, ECO:0000269|PubMed:19090677
source Swiss-Prot : SWS_FT_FI2

55) chain A
residue 77
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI3

56) chain B
residue 77
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI3

57) chain C
residue 77
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P34884
source Swiss-Prot : SWS_FT_FI3


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