eF-site ID 6b09-B
PDB Code 6b09
Chain B

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Title Crystal structure of HsNUDT16 in complex with diADPR (soaked)
Classification HYDROLASE
Compound U8 snoRNA-decapping enzyme
Source (NUD16_HUMAN)
Sequence B:  ARRLELGEALALGSGWRHVCHALLYAPDPGMLFGRIPLRY
AILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGE
AAAAFRVERTDYRSSHVPRVVAHFYAKRLTLEELLAVEAG
ATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGS
AREQLLEALQDLGLL
Description


Functional site

1) chain B
residue 38
type
sequence R
description binding site for residue C7G A 401
source : AC1

2) chain B
residue 24
type
sequence H
description binding site for residue C7G B 401
source : AC5

3) chain B
residue 50
type
sequence R
description binding site for residue C7G B 401
source : AC5

4) chain B
residue 59
type
sequence G
description binding site for residue C7G B 401
source : AC5

5) chain B
residue 60
type
sequence G
description binding site for residue C7G B 401
source : AC5

6) chain B
residue 61
type
sequence F
description binding site for residue C7G B 401
source : AC5

7) chain B
residue 76
type
sequence E
description binding site for residue C7G B 401
source : AC5

8) chain B
residue 80
type
sequence E
description binding site for residue C7G B 401
source : AC5

9) chain B
residue 108
type
sequence A
description binding site for residue C7G B 401
source : AC5

10) chain B
residue 136
type
sequence E
description binding site for residue C7G B 401
source : AC5

11) chain B
residue 164
type
sequence I
description binding site for residue C7G B 401
source : AC5

12) chain B
residue 166
type
sequence S
description binding site for residue C7G B 401
source : AC5

13) chain B
residue 167
type
sequence A
description binding site for residue C7G B 401
source : AC5

14) chain B
residue 170
type
sequence Q
description binding site for residue C7G B 401
source : AC5

15) chain B
residue 76
type
sequence E
description binding site for residue MG B 402
source : AC6

16) chain B
residue 76
type
sequence E
description binding site for residue MG B 403
source : AC7

17) chain B
residue 80
type
sequence E
description binding site for residue MG B 403
source : AC7

18) chain B
residue 132
type
sequence D
description binding site for residue MG B 403
source : AC7

19) chain B
residue 136
type
sequence E
description binding site for residue MG B 403
source : AC7

20) chain B
residue 31
type
sequence D
description binding site for residue NA B 404
source : AC8

21) chain B
residue 40
type
sequence P
description binding site for residue NA B 404
source : AC8

22) chain B
residue 42
type
sequence R
description binding site for residue NA B 404
source : AC8

23) chain B
residue 59
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:32432673, ECO:0000305|PubMed:26121039, ECO:0007744|PDB:6X7U
source Swiss-Prot : SWS_FT_FI2

24) chain B
residue 76
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:Q6TEC1
source Swiss-Prot : SWS_FT_FI3

25) chain B
residue 80
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:Q6TEC1
source Swiss-Prot : SWS_FT_FI3

26) chain B
residue 99
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:32432673, ECO:0007744|PDB:6X7U, ECO:0007744|PDB:6X7V
source Swiss-Prot : SWS_FT_FI4

27) chain B
residue 173
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:32432673, ECO:0007744|PDB:6X7U, ECO:0007744|PDB:6X7V
source Swiss-Prot : SWS_FT_FI4

28) chain B
residue 24
type BINDING
sequence H
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

29) chain B
residue 50
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

30) chain B
residue 57
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

31) chain B
residue 170
type BINDING
sequence Q
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1


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