eF-site ID 6b09-A
PDB Code 6b09
Chain A

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Title Crystal structure of HsNUDT16 in complex with diADPR (soaked)
Classification HYDROLASE
Compound U8 snoRNA-decapping enzyme
Source (NUD16_HUMAN)
Sequence A:  GARRLELGEALALGWRHVCHALLYAPDPGMLFGRIPLRYA
ILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGEA
AAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLAVE
AGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFI
GSAREQLLEALQDLGL
Description


Functional site

1) chain A
residue 20
type
sequence R
description binding site for residue C7G A 401
source : AC1

2) chain A
residue 24
type
sequence H
description binding site for residue C7G A 401
source : AC1

3) chain A
residue 50
type
sequence R
description binding site for residue C7G A 401
source : AC1

4) chain A
residue 51
type
sequence F
description binding site for residue C7G A 401
source : AC1

5) chain A
residue 60
type
sequence G
description binding site for residue C7G A 401
source : AC1

6) chain A
residue 61
type
sequence F
description binding site for residue C7G A 401
source : AC1

7) chain A
residue 76
type
sequence E
description binding site for residue C7G A 401
source : AC1

8) chain A
residue 80
type
sequence E
description binding site for residue C7G A 401
source : AC1

9) chain A
residue 136
type
sequence E
description binding site for residue C7G A 401
source : AC1

10) chain A
residue 164
type
sequence I
description binding site for residue C7G A 401
source : AC1

11) chain A
residue 166
type
sequence S
description binding site for residue C7G A 401
source : AC1

12) chain A
residue 167
type
sequence A
description binding site for residue C7G A 401
source : AC1

13) chain A
residue 170
type
sequence Q
description binding site for residue C7G A 401
source : AC1

14) chain A
residue 50
type
sequence R
description binding site for residue MG A 402
source : AC2

15) chain A
residue 59
type
sequence G
description binding site for residue MG A 402
source : AC2

16) chain A
residue 80
type
sequence E
description binding site for residue MG A 402
source : AC2

17) chain A
residue 76
type
sequence E
description binding site for residue MG A 403
source : AC3

18) chain A
residue 80
type
sequence E
description binding site for residue MG A 403
source : AC3

19) chain A
residue 132
type
sequence D
description binding site for residue MG A 403
source : AC3

20) chain A
residue 136
type
sequence E
description binding site for residue MG A 403
source : AC3

21) chain A
residue 76
type
sequence E
description binding site for residue NA A 405
source : AC4

22) chain A
residue 79
type
sequence E
description binding site for residue NA A 405
source : AC4

23) chain A
residue 36
type
sequence F
description binding site for residue C7G B 401
source : AC5

24) chain A
residue 149
type
sequence R
description binding site for residue C7G B 401
source : AC5

25) chain A
residue 150
type
sequence D
description binding site for residue C7G B 401
source : AC5

26) chain A
residue 169
type
sequence E
description binding site for residue C7G B 401
source : AC5

27) chain A
residue 59
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:32432673, ECO:0000305|PubMed:26121039, ECO:0007744|PDB:6X7U
source Swiss-Prot : SWS_FT_FI2

28) chain A
residue 76
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:Q6TEC1
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 80
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:Q6TEC1
source Swiss-Prot : SWS_FT_FI3

30) chain A
residue 99
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:32432673, ECO:0007744|PDB:6X7U, ECO:0007744|PDB:6X7V
source Swiss-Prot : SWS_FT_FI4

31) chain A
residue 173
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:32432673, ECO:0007744|PDB:6X7U, ECO:0007744|PDB:6X7V
source Swiss-Prot : SWS_FT_FI4

32) chain A
residue 24
type BINDING
sequence H
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 50
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 57
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 170
type BINDING
sequence Q
description BINDING => ECO:0000305|PubMed:26121039
source Swiss-Prot : SWS_FT_FI1


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