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eF-site ID
|
6az3-C |
PDB Code
|
6az3 |
Chain
|
C |
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click to enlarge
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Title
|
Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin |
Classification
|
RIBOSOME/ANTIBIOTIC |
Compound
|
ribosomal protein uL2 |
Source
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ORGANISM_SCIENTIFIC: Leishmania donovani; |
|
Sequence
|
C: |
RPSVSVYSASSDSVVGTCPLPAVFTAPIRNDIVKFVHTNM
AKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGGGT
STSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAV
VSALAASSVPSLVMSRGHRIDNVPEVPLVVEDSIQGYEKT
KEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVAR
RGPMLVMPNNKGTRAFRNIFGLDLANVSALNLLHLAPGGH
VGRFVIWTKSAFEQLDKIFGTFTEASAVKKGFTLPAPMLT
NTDVTRIMQSEEVRRVLKPKKLQAKKASRYQTPTNGIKNR
RLRLRLNPYVKRETAAAKGMRNVANRDARRKAKMARVTKA
KKAATK
|
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Description
|
|
Functional site
|
|
1)
|
chain |
C |
residue |
109 |
type |
|
sequence |
R
|
description |
binding site for residue PAR 1 1802
|
source |
: AC2
|
|
2)
|
chain |
C |
residue |
98 |
type |
|
sequence |
G
|
description |
binding site for residue MG 1 1806
|
source |
: AC6
|
|
3)
|
chain |
C |
residue |
59 |
type |
|
sequence |
M
|
description |
binding site for residue MG 1 1823
|
source |
: AE2
|
|
4)
|
chain |
C |
residue |
115-141 |
type |
prosite |
sequence |
NLHQKRFAVVSALAASSVPSLVMSRGH
|
description |
RIBOSOMAL_L1E Ribosomal protein L1e signature. NlhqKrfAVvSALaASSvpslvmsRGH
|
source |
prosite : PS00939
|
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