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eF-site ID
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6az3-C |
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PDB Code
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6az3 |
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Chain
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C |
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click to enlarge
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Title
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Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin |
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Classification
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RIBOSOME/ANTIBIOTIC |
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Compound
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ribosomal protein uL2 |
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Source
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ORGANISM_SCIENTIFIC: Leishmania donovani; |
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Sequence
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C: |
RPSVSVYSASSDSVVGTCPLPAVFTAPIRNDIVKFVHTNM
AKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGGGT
STSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAV
VSALAASSVPSLVMSRGHRIDNVPEVPLVVEDSIQGYEKT
KEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVAR
RGPMLVMPNNKGTRAFRNIFGLDLANVSALNLLHLAPGGH
VGRFVIWTKSAFEQLDKIFGTFTEASAVKKGFTLPAPMLT
NTDVTRIMQSEEVRRVLKPKKLQAKKASRYQTPTNGIKNR
RLRLRLNPYVKRETAAAKGMRNVANRDARRKAKMARVTKA
KKAATK
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Description
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Functional site
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1)
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chain |
C |
| residue |
109 |
| type |
|
| sequence |
R
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| description |
binding site for residue PAR 1 1802
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| source |
: AC2
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2)
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chain |
C |
| residue |
98 |
| type |
|
| sequence |
G
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| description |
binding site for residue MG 1 1806
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| source |
: AC6
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3)
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chain |
C |
| residue |
59 |
| type |
|
| sequence |
M
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| description |
binding site for residue MG 1 1823
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| source |
: AE2
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4)
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chain |
C |
| residue |
115-141 |
| type |
prosite |
| sequence |
NLHQKRFAVVSALAASSVPSLVMSRGH
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| description |
RIBOSOMAL_L1E Ribosomal protein L1e signature. NlhqKrfAVvSALaASSvpslvmsRGH
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| source |
prosite : PS00939
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