eF-site ID 6akh-ADPT
PDB Code 6akh
Chain A, D, P, T

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Title Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Adenine and Incoming Mn-dUMPNPP
Classification TRANSFERASE/DNA
Compound DNA-directed DNA/RNA polymerase mu
Source (6AKH)
Sequence A:  MPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLL
TFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELL
EHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYRE
GLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRSDVDA
LQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITH
PKEGQEAGLLPRVMCRLQDQGLILYHQHAFERSFCIFRLP
QPGSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRF
SRKEKGLWLNSHGLFDPEQKTFFQAASEEDIFRHLGLEYL
PPEQRNA
D:  GCCG
P:  CGTA
T:  CGGCATACG
Description


Functional site

1) chain A
residue 149
type
sequence L
description binding site for residue EPE A 501
source : AC1

2) chain A
residue 325
type
sequence K
description binding site for residue EPE A 501
source : AC1

3) chain A
residue 326
type
sequence L
description binding site for residue EPE A 501
source : AC1

4) chain A
residue 327
type
sequence Q
description binding site for residue EPE A 501
source : AC1

5) chain A
residue 330
type
sequence D
description binding site for residue MN A 502
source : AC2

6) chain A
residue 332
type
sequence D
description binding site for residue MN A 502
source : AC2

7) chain A
residue 330
type
sequence D
description binding site for residue MN A 503
source : AC3

8) chain A
residue 332
type
sequence D
description binding site for residue MN A 503
source : AC3

9) chain A
residue 418
type
sequence D
description binding site for residue MN A 503
source : AC3

10) chain P
residue 4
type
sequence A
description binding site for residue MN A 503
source : AC3

11) chain A
residue 241
type
sequence T
description binding site for residue NA A 504
source : AC4

12) chain A
residue 243
type
sequence I
description binding site for residue NA A 504
source : AC4

13) chain A
residue 246
type
sequence V
description binding site for residue NA A 504
source : AC4

14) chain P
residue 3
type
sequence T
description binding site for residue NA A 504
source : AC4

15) chain A
residue 319
type
sequence G
description binding site for residue DUP A 505
source : AC5

16) chain A
residue 320
type
sequence G
description binding site for residue DUP A 505
source : AC5

17) chain A
residue 323
type
sequence R
description binding site for residue DUP A 505
source : AC5

18) chain A
residue 325
type
sequence K
description binding site for residue DUP A 505
source : AC5

19) chain A
residue 328
type
sequence G
description binding site for residue DUP A 505
source : AC5

20) chain A
residue 329
type
sequence H
description binding site for residue DUP A 505
source : AC5

21) chain A
residue 330
type
sequence D
description binding site for residue DUP A 505
source : AC5

22) chain A
residue 332
type
sequence D
description binding site for residue DUP A 505
source : AC5

23) chain A
residue 433
type
sequence G
description binding site for residue DUP A 505
source : AC5

24) chain A
residue 434
type
sequence W
description binding site for residue DUP A 505
source : AC5

25) chain A
residue 436
type
sequence G
description binding site for residue DUP A 505
source : AC5

26) chain A
residue 438
type
sequence K
description binding site for residue DUP A 505
source : AC5

27) chain P
residue 4
type
sequence A
description binding site for residue DUP A 505
source : AC5

28) chain T
residue 5
type
sequence A
description binding site for residue DUP A 505
source : AC5

29) chain A
residue 190
type
sequence P
description binding site for residue EDO A 506
source : AC6

30) chain A
residue 191
type
sequence S
description binding site for residue EDO A 506
source : AC6

31) chain A
residue 192
type
sequence P
description binding site for residue EDO A 506
source : AC6

32) chain A
residue 198
type
sequence Q
description binding site for residue EDO A 506
source : AC6

33) chain A
residue 387
type
sequence R
description binding site for residue EDO A 507
source : AC7

34) chain A
residue 433
type
sequence G
description binding site for residue EDO A 507
source : AC7

35) chain A
residue 434
type
sequence W
description binding site for residue EDO A 507
source : AC7

36) chain A
residue 445
type
sequence R
description binding site for residue EDO A 507
source : AC7

37) chain P
residue 4
type
sequence A
description binding site for residue EDO A 507
source : AC7

38) chain A
residue 438
type
sequence K
description binding site for residue EDO A 508
source : AC8

39) chain A
residue 442
type
sequence R
description binding site for residue EDO A 508
source : AC8

40) chain A
residue 144
type
sequence Q
description binding site for residue EDO A 510
source : AD1

41) chain D
residue 4
type
sequence G
description binding site for residue EDO A 510
source : AD1

42) chain A
residue 387
type
sequence R
description binding site for residue EDO A 511
source : AD2

43) chain A
residue 445
type
sequence R
description binding site for residue EDO A 511
source : AD2

44) chain A
residue 457
type
sequence N
description binding site for residue EDO A 511
source : AD2

45) chain A
residue 458
type
sequence S
description binding site for residue EDO A 511
source : AD2

46) chain T
residue 6
type
sequence T
description binding site for residue EDO A 511
source : AD2

47) chain T
residue 7
type
sequence A
description binding site for residue EDO A 511
source : AD2

48) chain D
residue 2
type
sequence C
description binding site for residue EDO T 101
source : AD3

49) chain T
residue 1
type
sequence C
description binding site for residue EDO T 101
source : AD3

50) chain T
residue 2
type
sequence G
description binding site for residue EDO T 101
source : AD3

51) chain A
residue 319-338
type prosite
sequence GGFRRGKLQGHDVDFLITHP
description DNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
source prosite : PS00522

52) chain A
residue 330
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

53) chain A
residue 332
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

54) chain A
residue 418
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

55) chain A
residue 433
type SITE
sequence G
description Responsible for the low discrimination between dNTP and rNTP
source Swiss-Prot : SWS_FT_FI2


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