eF-site ID 6ak9-ADPT
PDB Code 6ak9
Chain A, D, P, T

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Title Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Cytosine and Incoming Ca-8oxodGTP
Classification TRANSFERASE/DNA
Compound DNA-directed DNA/RNA polymerase mu
Source (6AK9)
Sequence A:  MPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLL
TFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELL
EHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYRE
GLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRSDVDA
LQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITH
PKEGQEAGLLPRVMCRLQDQGLILYHQHAFERSFCIFRLP
QPGSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRF
SRKEKGLWLNSHGLFDPEQKTFFQAASEEDIFRHLGLEYL
PPEQRNA
D:  GCCG
P:  CGTA
T:  CGGCCTACG
Description


Functional site

1) chain A
residue 330
type
sequence D
description binding site for residue CA A 501
source : AC1

2) chain A
residue 332
type
sequence D
description binding site for residue CA A 501
source : AC1

3) chain A
residue 330
type
sequence D
description binding site for residue CA A 502
source : AC2

4) chain A
residue 332
type
sequence D
description binding site for residue CA A 502
source : AC2

5) chain A
residue 418
type
sequence D
description binding site for residue CA A 502
source : AC2

6) chain P
residue 4
type
sequence A
description binding site for residue CA A 502
source : AC2

7) chain A
residue 319
type
sequence G
description binding site for residue 8DG A 503
source : AC3

8) chain A
residue 320
type
sequence G
description binding site for residue 8DG A 503
source : AC3

9) chain A
residue 323
type
sequence R
description binding site for residue 8DG A 503
source : AC3

10) chain A
residue 325
type
sequence K
description binding site for residue 8DG A 503
source : AC3

11) chain A
residue 328
type
sequence G
description binding site for residue 8DG A 503
source : AC3

12) chain A
residue 329
type
sequence H
description binding site for residue 8DG A 503
source : AC3

13) chain A
residue 330
type
sequence D
description binding site for residue 8DG A 503
source : AC3

14) chain A
residue 332
type
sequence D
description binding site for residue 8DG A 503
source : AC3

15) chain A
residue 433
type
sequence G
description binding site for residue 8DG A 503
source : AC3

16) chain A
residue 434
type
sequence W
description binding site for residue 8DG A 503
source : AC3

17) chain A
residue 436
type
sequence G
description binding site for residue 8DG A 503
source : AC3

18) chain A
residue 438
type
sequence K
description binding site for residue 8DG A 503
source : AC3

19) chain A
residue 445
type
sequence R
description binding site for residue 8DG A 503
source : AC3

20) chain P
residue 4
type
sequence A
description binding site for residue 8DG A 503
source : AC3

21) chain T
residue 5
type
sequence C
description binding site for residue 8DG A 503
source : AC3

22) chain A
residue 241
type
sequence T
description binding site for residue NA A 504
source : AC4

23) chain A
residue 243
type
sequence I
description binding site for residue NA A 504
source : AC4

24) chain A
residue 246
type
sequence V
description binding site for residue NA A 504
source : AC4

25) chain P
residue 3
type
sequence T
description binding site for residue NA A 504
source : AC4

26) chain A
residue 325
type
sequence K
description binding site for residue EPE A 505
source : AC5

27) chain A
residue 326
type
sequence L
description binding site for residue EPE A 505
source : AC5

28) chain A
residue 327
type
sequence Q
description binding site for residue EPE A 505
source : AC5

29) chain A
residue 387
type
sequence R
description binding site for residue EDO A 506
source : AC6

30) chain A
residue 433
type
sequence G
description binding site for residue EDO A 506
source : AC6

31) chain A
residue 434
type
sequence W
description binding site for residue EDO A 506
source : AC6

32) chain A
residue 445
type
sequence R
description binding site for residue EDO A 506
source : AC6

33) chain A
residue 458
type
sequence S
description binding site for residue EDO A 506
source : AC6

34) chain P
residue 4
type
sequence A
description binding site for residue EDO A 506
source : AC6

35) chain A
residue 190
type
sequence P
description binding site for residue EDO A 507
source : AC7

36) chain A
residue 191
type
sequence S
description binding site for residue EDO A 507
source : AC7

37) chain A
residue 192
type
sequence P
description binding site for residue EDO A 507
source : AC7

38) chain A
residue 198
type
sequence Q
description binding site for residue EDO A 507
source : AC7

39) chain A
residue 180
type
sequence C
description binding site for residue EDO A 508
source : AC8

40) chain A
residue 438
type
sequence K
description binding site for residue EDO A 508
source : AC8

41) chain A
residue 442
type
sequence R
description binding site for residue EDO A 508
source : AC8

42) chain A
residue 433
type SITE
sequence G
description Responsible for the low discrimination between dNTP and rNTP
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 330
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 332
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

45) chain A
residue 418
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

46) chain A
residue 319-338
type prosite
sequence GGFRRGKLQGHDVDFLITHP
description DNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
source prosite : PS00522


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