eF-site ID 6ahf-D
PDB Code 6ahf
Chain D

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Title CryoEM Reconstruction of Hsp104 N728A Hexamer
Classification CHAPERONE
Compound Heat shock protein 104
Source (HS104_YEAST)
Sequence D:  QFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPED
GSVPYLQNLIEKGRYDYDLFKKVVNRNLVRIPQQQPAPAE
ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSS
IQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLE
YLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIK
SNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFS
LDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDE
IHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIV
EKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGV
RILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAV
ARDSKPEELDSKERQLQLIQVEIKALERDEDADSTTKDRL
KLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDE
LENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVA
EEERRAGANSMIQNVVDSDTISETAARLTGIPVKKLSESE
NEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPR
QPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSE
LSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLF
DEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIM
TSALGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNR
ISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLN
LTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRIL
KNEIKDKETVNVVLEAEECLEVLPN
Description (1)  Heat shock protein 104


Functional site

1) chain D
residue 186
type
sequence V
description binding site for residue AGS D 1001
source : AC2

2) chain D
residue 187
type
sequence I
description binding site for residue AGS D 1001
source : AC2

3) chain D
residue 213
type
sequence E
description binding site for residue AGS D 1001
source : AC2

4) chain D
residue 214
type
sequence P
description binding site for residue AGS D 1001
source : AC2

5) chain D
residue 215
type
sequence G
description binding site for residue AGS D 1001
source : AC2

6) chain D
residue 216
type
sequence I
description binding site for residue AGS D 1001
source : AC2

7) chain D
residue 217
type
sequence G
description binding site for residue AGS D 1001
source : AC2

8) chain D
residue 218
type
sequence K
description binding site for residue AGS D 1001
source : AC2

9) chain D
residue 221
type
sequence I
description binding site for residue AGS D 1001
source : AC2

10) chain D
residue 351
type
sequence I
description binding site for residue AGS D 1001
source : AC2

11) chain D
residue 390
type
sequence D
description binding site for residue AGS D 1001
source : AC2

12) chain D
residue 393
type
sequence L
description binding site for residue AGS D 1001
source : AC2

13) chain D
residue 333
type
sequence R
description binding site for residue AGS E 1001
source : AC3

14) chain D
residue 761
type
sequence E
description binding site for residue AGS E 1002
source : AC4

15) chain D
residue 211
type
sequence I
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

16) chain D
residue 285
type
sequence E
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

17) chain D
residue 315
type
sequence A
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

18) chain D
residue 316
type
sequence T
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

19) chain D
residue 317
type
sequence T
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

20) chain D
residue 318
type
sequence N
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

21) chain D
residue 319
type
sequence N
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

22) chain D
residue 320
type
sequence E
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

23) chain D
residue 322
type
sequence R
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

24) chain D
residue 323
type
sequence S
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

25) chain D
residue 324
type
sequence I
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

26) chain D
residue 325
type
sequence V
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC7

27) chain D
residue 211
type
sequence I
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

28) chain D
residue 285
type
sequence E
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

29) chain D
residue 315
type
sequence A
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

30) chain D
residue 316
type
sequence T
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

31) chain D
residue 317
type
sequence T
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

32) chain D
residue 318
type
sequence N
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

33) chain D
residue 319
type
sequence N
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

34) chain D
residue 320
type
sequence E
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

35) chain D
residue 322
type
sequence R
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

36) chain D
residue 323
type
sequence S
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

37) chain D
residue 324
type
sequence I
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

38) chain D
residue 325
type
sequence V
description binding site for Ligand TYR D 321 bound to THR D 317
source : AC8

39) chain D
residue 204
type
sequence I
description binding site for Di-peptide ARG E 203 and TYR F 359
source : AC9

40) chain D
residue 204
type
sequence I
description binding site for Di-peptide ILE E 204 and TYR F 359
source : AD1

41) chain D
residue 212
type BINDING
sequence G
description BINDING => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

42) chain D
residue 614
type BINDING
sequence G
description BINDING => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

43) chain D
residue 206
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI3

44) chain D
residue 306
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI4

45) chain D
residue 535
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI4

46) chain D
residue 499
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI5

47) chain D
residue 442
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI6

48) chain D
residue 620
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:14557538
source Swiss-Prot : SWS_FT_FI7


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