|
eF-site ID
|
6a6l-A |
PDB Code
|
6a6l |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Crystal structure of the cold shock domain of YB-1 in complex with m5C RNA |
Classification
|
RNA BINDING PROTEIN/RNA |
Compound
|
Nuclease-sensitive element-binding protein 1 |
Source
|
(6A6L) |
|
Sequence
|
A: |
KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI
KKNNPYLRSVGDGETVEFDVVEGEKGAEAANVTGPG
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
72-91 |
type |
prosite |
sequence |
YGFINRNDTKEDVFVHQTAI
|
description |
CSD_1 Cold-shock (CSD) domain signature. YGFInrndtkeDVFvHqTaI
|
source |
prosite : PS00352
|
|
2)
|
chain |
A |
residue |
65 |
type |
SITE |
sequence |
W
|
description |
Important for C5-methylcytosine-recognition => ECO:0000269|PubMed:31358969
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
A |
residue |
102 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine; by PKB/AKT1 => ECO:0000269|PubMed:15806160, ECO:0007744|PubMed:19690332
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|