eF-site ID 6a5p-e
PDB Code 6a5p
Chain e

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Title RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome
Classification TRANSCRIPTION/RNA/DNA
Compound DNA-directed RNA polymerase subunit
Source ORGANISM_COMMON: Yeast; ORGANISM_SCIENTIFIC: Komagataella phaffii (strain GS115 / ATCC 20864);
Sequence e:  HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF
KTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVT
IMPKDIQLARRIRGERA
Description


Functional site

1) chain e
residue 57
type MOD_RES
sequence S
description Phosphoserine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI21

2) chain e
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:29211711
source Swiss-Prot : SWS_FT_FI22

3) chain e
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI23

4) chain e
residue 86
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI24

5) chain e
residue 107
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI25

6) chain e
residue 115
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI26

7) chain e
residue 122
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:27436229
source Swiss-Prot : SWS_FT_FI27

8) chain e
residue 64
type MOD_RES
sequence K
description Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI13


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