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eF-site ID
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6a5p-J |
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PDB Code
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6a5p |
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Chain
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J |
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click to enlarge
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Title
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RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome |
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Classification
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TRANSCRIPTION/RNA/DNA |
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Compound
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DNA-directed RNA polymerase subunit |
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Source
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ORGANISM_COMMON: Yeast; ORGANISM_SCIENTIFIC: Komagataella phaffii (strain GS115 / ATCC 20864); |
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Sequence
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J: |
MIIPVRCFSCGKVVGDKWDAYLRLLEEGKQEGDALDELKL
KRYCCRRMVLTHVDLIEKFLRYNPLE
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Description
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Functional site
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1)
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chain |
J |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
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| source |
: AC8
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2)
|
chain |
J |
| residue |
10 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
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3)
|
chain |
J |
| residue |
44 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
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4)
|
chain |
J |
| residue |
45 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
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5)
|
chain |
J |
| residue |
2-11 |
| type |
prosite |
| sequence |
IIPVRCFSCG
|
| description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFSCG
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| source |
prosite : PS01112
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