eF-site ID 6a5p-ABCDEFGHIJKLNPTabcdefgh
PDB Code 6a5p
Chain A, B, C, D, E, F, G, H, I, J, K, L, N, P, T, a, b, c, d, e, f, g, h
Title RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome
Classification TRANSCRIPTION/RNA/DNA
Compound DNA-directed RNA polymerase subunit
Source ORGANISM_COMMON: Yeast; ORGANISM_SCIENTIFIC: Komagataella phaffii (strain GS115 / ATCC 20864);
Sequence A:  SQFPYSSAPLRSVKEVQFGLLSPEEIRAISVVKIEYPEIM
DESRQRPREGGLNDPKLGSIDRNFKCQTCGEGMAECPGHF
GHMELAKPVFHIGFIPKIKKVCECICMNCGKLLLDETNPT
MAQAIRIRDPKKRFNAVWQLCKTKMVCEADAPKVVSRGGC
GNTQPVVRKDGMKLWGTWKKSRDAQPERKLLTPGEILNVF
KHISPEDCFRLGFNEDYARPEWMIITVLPVPPPQVRPSIA
MDETTQGQDDLTHKLSDILKANINVQKLEMDGSPQHIINE
VEQLLQFHVATYMDNDIAGQPQALQKSGRPVKAIRARLKG
KEGRLRGNLMGKRVDFSARTVISGDPNLELDQVGVPISIA
KTLSYPETVTQYNIHRLTEYVRNGPNEHPGAKYVIRDNGD
RIDLRYHKRAGDIVLQYGWKVERHLMDDDPVLFNRQPSLH
KMSMMAHRVKVMPYSTFRLNLSVTSPYNADFDGDEMNLHV
PQSEETRAELSQLCAVPLQIVSPQSNKPVMGIVQDTLCGV
RKMTLRDTFIEYEQVMNMLFWVPSWDGVVPQPAILKPKPL
WTGKQLLSIAIPSGIHLQRTDGGNSLLSPKDNGMLIVDGK
VMFGVVDKKTVGSGGGGLIHTVMREKGPKICAELFGNIQK
VVNYWLLHNGFSIGIGDAIADASTMKEITHAISSAKEQVQ
EIIYKAQHNELELKPGMTLRESFEGEVSRTLNDARDSAGR
SAEMNLKDLNNVKQMVSAGSKGSFINIAQMSACVGQQMVE
GKRIAFGFADRSLPHFTKDDFSPESKGFVENSYLRGLTPQ
EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVH
YDGTTRNSLGDIIQFLYGEDGLDGTQVERQTIDTIPGSDK
AFHKRYYVDLMDEKNSIKPDVIEYAADILGDVELQKELNS
EYEQLVSDRKFLREIVFVNGDHNWPLPVNLRRIIQNAQQI
FHLDRAKASDLTIPEIIHGVRDLCKKLFVLRGENELIKEA
QQNATSLFQCLVRARLATRRILEEFRLNRDAFEWVLGTIE
AQFQRSLVHPGEMVGVIAAQSIGEPATQMNVTLGVPRLKE
ILNVAKNIKTPALTVYLDREIALDIEKAKVIQSSIEYTTL
KNVTSATEIYYDPDPTSTVIEEDFDTVEAYFSQSPWLLRL
ELDRARMLDKQLTMNQVADKISEVFSDDLFVMWSEDNADK
LIIRCRVIEEDQMLKRIEAHMLDLIALRGIPGISKVYMVK
HKVSVPDESGEYKNEELWALETDGINLAEVMAVPGVDSSR
TYSNSFVEILSVLGIEATRSSLYKEILNVIAFDGSYVNYR
HMALLVDVMTSRGYLMAITRHGINRADTGALMRCSFEETV
EILFEAGAAAELDDCRGVSENVMLGQLAPMGTGAFDVMID
EKLLTSLP
B:  DDTITTEDCWTVISAFFEEKGLVSQQLDSFDEFMETSIQD
LVWEEPRLILDQPAQHTNEKDNINKRYEIRFGKIYLSRPT
MTEADGTTHAMFPQEARLRNLTYSSPVYLDMEKSMFTSID
GNKVHIGKVPIMLRSKFCSLRTLDEVDLYKMKECPYDMGG
YFVINGSEKVLIAQERSAANIVQVFKKAAPSPISHVAEIR
SALEKGSRLISTMQIKLYGREDKGTGRTIKATLPYVKQDI
PIVIVFRALGVVPDGEILQHICYDENDWQMLEMLKPCIEE
GFVIQDKEVALDFIGRRGSAALGIRREKRIQYAKDILQKE
LLPHITQEEGFETRKTFFLGYMVNRLLLCALERKDQDDRD
HFGKKRLDLAGPLLANLFRILFRKLTREIYRYMQRCIETD
RDFNLNLAVKSTTITSGLKYSLATGNWGEQKKAMSSRAGV
SQVLNRYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHW
GLVCPAETPEGQACGLVKNLSLLSGISIGSPSEPIINFLE
EWGMEPLEDYDPAQHTKSTRIFVNGVWTGIHRDPSMLVST
MRDLRRSGAISPEVSIIRDIREREFKIFTDVGRVYRPLFI
VEDDESKDNKGELRITKEHIRKIQQGYDDDVYGWSSLVTS
GVIEYVDGEEEETIMIAMTPEDLQTRSLNDTAKRIKPEMS
TSSHHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQS
AMGKQAMGVFLTNYNVRMDTMANILYYPQKPLAKTQAMEY
LKFRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDRGLF
RSLFFRSYMDQEKRFGISIVEEFEKPTRATTLRLKHGTYE
KLDEDGLIAPGVRVSGDDIIIGKTTPIPPYHTKRDASTPL
RSTENGIVDQVLLTTNQEGLKFVKVRMRTTKVPQIGDKFA
SRHGQKGTIGVTYRHEDMPFSAEGIVPDLIINPHAIPSRM
TVAHLIECLLSKVGSIRGYEGDATPFTDLTVDAVSNLLRD
NGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDD
KIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAH
GAAGFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFE
CRSCKNKTNIYQLHIPYAAKLLFQELMAMNIAPRLYTERS
G
C:  EPKVNIINAQDDEVELMLSDVNLSLANSLRRTMLAEVPTL
AIDLVEIKMNTSVLADEFISHRLGLIPLVSEDVEEMKYSR
DCTCEDYCDECSVVLELSARHEGEEGTTDVYSSSLIKVSG
PGNLNVGEPVRRDDYDQGILLCKLRNHQELNIRCIAKKGI
AKEHAKWSPCSAIAFEYDPHNKLKHTDFWFEVDAKKEWPD
SKYATWEEPPKPGEVFDYKAKPNRFYMTVETTGSLKANQV
FSRGIKTLQEKLANVLFELENSR
D:  VSTSTVGEENATLLRLGPEFALKQYDHDGNEHDLIALSLS
ESRLLIREALKARSRARNGGVIDDDELAKVTSGAVANGVV
KKTLDYLNTFARFKDEETCTAVDQLLHLHPFEIAQLSSLG
CEDVDEAITLIPSLAAKKEVNLQRILDELNRLEDPY
E:  EDNNRIISRLWRSFRTVKEMAADRGYFISQEEMDQSLEEF
RSKICDSMGNPQRKLMSFLANPTPEALEKYSDLGTLWVEF
CDEPSVGIKTMRNFCLRIQEKNFSTGIFIYQNNITPSANK
MIPTVSPAIIETFQESDLVVNITHHELVPKHIRLSDGEKS
QLLQRYKLKESQLPRIQREDPVARYLGLKRGQVVKIIRRS
ETSGRYASYRICL
F:  ELAILKEERTTTPYLTKYERARILGTRALQISMNAPVLVD
IEGETDPLQIAMKELSQRKIPLVIRRYLPDGSYEDWGCDE
LIVD
G:  MFFLKDLSLILTLHPSYFGPQMNQYLREKLLTDVEGTCTG
QFGYIVTVLDGMNIDVGKGRIIPGSGSAEFEVKYRAVVWK
PFKGEVVDAIVSNVSPIGFFADVGPLNVFVSTRLIPDNLV
YNPSNSPPAYMSNDELITKGSKVRLKVVGTRTDVNEIYAI
GSIKEDFLGAI
H:  SALFDDIFTVQTVDNGRYNKVSRIIGISTTNSAIKLTLDI
NNEMFPVSQDDSLTVTLANSLSLKSWRPPKPTDKSLADDY
DYVMFGTVYKFEEGDEDKIKVYVSFGGLLMCLEGGYKSLA
SLKQDNLYILIRR
I:  SFRFCLECNNMLYPKEDKENQRLLYSCRNCDYTELAEDPK
VYRHELITNIGETAGIVDDIGQDPTLPRSDKECPECHSRD
CVFFQSQQRRKDTNMTLFYVCLNCKKTFRDE
J:  MIIPVRCFSCGKVVGDKWDAYLRLLEEGKQEGDALDELKL
KRYCCRRMVLTHVDLIEKFLRYNPLE
K:  MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDH
TLANLLREELALYPDVTFVAYKVEHPLFANFVMRLQTEEG
TRPKQALERACASIINKLKTLDHKFNEEWNIKN
L:  GVKYTCGACAHNFSLNKSDPVRCKECGHRVIYKARTKRMI
QFDAR
N:  GGTGTGTTTGGGTTTTCGTTGTTTTTTTCTGTCTCGTGCC
TGGTGTCTTGGGTGTAATCCCCTTGGCGGTTAAAACGCGG
GGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGT
CTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT
P:  UGGGUGGUGGC
T:  ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGA
CAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCC
CGCGTTTTAACCGCCAAGGGGATTACACCCAAGACACCAG
GCACGAGACAGAAAAAAACAACGAAAACGGCCACCACCCA
AACACACC
a:  PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD
FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV
TIMPKDIQLARRIRGER
b:  RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFL
ENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
c:  TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVL
EYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNK
LLGRVTIAQGGVLPNIQAVLLPK
d:  RSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIF
ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHA
VSEGTKAVTKYTSAK
e:  HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF
KTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVT
IMPKDIQLARRIRGERA
f:  NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN
VIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
g:  AKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAA
VLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL
NKLLGRVTIAQGGVLPNIQAVLLPK
h:  SRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFE
RIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAV
SEGTKAVTKYTSA
Description


Functional site

1) chain A
residue 67
type
sequence C
description binding site for residue ZN A 1801
source : AC1

2) chain A
residue 70
type
sequence C
description binding site for residue ZN A 1801
source : AC1

3) chain A
residue 77
type
sequence C
description binding site for residue ZN A 1801
source : AC1

4) chain A
residue 80
type
sequence H
description binding site for residue ZN A 1801
source : AC1

5) chain A
residue 107
type
sequence C
description binding site for residue ZN A 1802
source : AC2

6) chain A
residue 148
type
sequence C
description binding site for residue ZN A 1802
source : AC2

7) chain A
residue 167
type
sequence G
description binding site for residue ZN A 1802
source : AC2

8) chain A
residue 168
type
sequence C
description binding site for residue ZN A 1802
source : AC2

9) chain A
residue 482
type
sequence D
description binding site for residue MG A 1803
source : AC3

10) chain A
residue 484
type
sequence D
description binding site for residue MG A 1803
source : AC3

11) chain P
residue 10
type
sequence C
description binding site for residue MG A 1803
source : AC3

12) chain B
residue 1163
type
sequence C
description binding site for residue ZN B 1301
source : AC4

13) chain B
residue 1166
type
sequence C
description binding site for residue ZN B 1301
source : AC4

14) chain B
residue 1182
type
sequence C
description binding site for residue ZN B 1301
source : AC4

15) chain B
residue 1185
type
sequence C
description binding site for residue ZN B 1301
source : AC4

16) chain C
residue 85
type
sequence C
description binding site for residue ZN C 401
source : AC5

17) chain C
residue 87
type
sequence C
description binding site for residue ZN C 401
source : AC5

18) chain C
residue 91
type
sequence C
description binding site for residue ZN C 401
source : AC5

19) chain C
residue 93
type
sequence E
description binding site for residue ZN C 401
source : AC5

20) chain I
residue 75
type
sequence C
description binding site for residue ZN I 201
source : AC6

21) chain I
residue 77
type
sequence E
description binding site for residue ZN I 201
source : AC6

22) chain I
residue 78
type
sequence C
description binding site for residue ZN I 201
source : AC6

23) chain I
residue 103
type
sequence C
description binding site for residue ZN I 201
source : AC6

24) chain I
residue 105
type
sequence N
description binding site for residue ZN I 201
source : AC6

25) chain I
residue 106
type
sequence C
description binding site for residue ZN I 201
source : AC6

26) chain I
residue 9
type
sequence E
description binding site for residue ZN I 202
source : AC7

27) chain I
residue 10
type
sequence C
description binding site for residue ZN I 202
source : AC7

28) chain I
residue 32
type
sequence C
description binding site for residue ZN I 202
source : AC7

29) chain J
residue 7
type
sequence C
description binding site for residue ZN J 101
source : AC8

30) chain J
residue 10
type
sequence C
description binding site for residue ZN J 101
source : AC8

31) chain J
residue 44
type
sequence C
description binding site for residue ZN J 101
source : AC8

32) chain J
residue 45
type
sequence C
description binding site for residue ZN J 101
source : AC8

33) chain L
residue 33
type
sequence C
description binding site for residue ZN L 101
source : AC9

34) chain L
residue 35
type
sequence A
description binding site for residue ZN L 101
source : AC9

35) chain L
residue 36
type
sequence C
description binding site for residue ZN L 101
source : AC9

36) chain L
residue 50
type
sequence C
description binding site for residue ZN L 101
source : AC9

37) chain d
residue 83
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI14

38) chain d
residue 89
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI14

39) chain h
residue 83
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI14

40) chain h
residue 89
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI14

41) chain d
residue 112
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q00729
source Swiss-Prot : SWS_FT_FI15

42) chain h
residue 112
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q00729
source Swiss-Prot : SWS_FT_FI15

43) chain f
residue 91
type MOD_RES
sequence K
description Phosphothreonine => ECO:0000250|UniProtKB:Q00729
source Swiss-Prot : SWS_FT_FI15

44) chain d
residue 109
type CARBOHYD
sequence S
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI16

45) chain h
residue 109
type CARBOHYD
sequence S
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI16

46) chain b
residue 79
type CARBOHYD
sequence K
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI16

47) chain f
residue 59
type CARBOHYD
sequence K
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI16

48) chain f
residue 79
type CARBOHYD
sequence K
description O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
source Swiss-Prot : SWS_FT_FI16

49) chain d
residue 117
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:16307923, ECO:0000269|PubMed:16627869, ECO:0000269|PubMed:16713563
source Swiss-Prot : SWS_FT_FI18

50) chain h
residue 117
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:16307923, ECO:0000269|PubMed:16627869, ECO:0000269|PubMed:16713563
source Swiss-Prot : SWS_FT_FI18

51) chain d
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:21726816
source Swiss-Prot : SWS_FT_FI20

52) chain h
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:21726816
source Swiss-Prot : SWS_FT_FI20

53) chain h
residue 40
type MOD_RES
sequence K
description N6-lactoyllysine; alternate => ECO:0000269|PubMed:31645732
source Swiss-Prot : SWS_FT_FI3

54) chain h
residue 82
type MOD_RES
sequence K
description N6-lactoyllysine; alternate => ECO:0000269|PubMed:31645732
source Swiss-Prot : SWS_FT_FI3

55) chain d
residue 40
type MOD_RES
sequence K
description N6-lactoyllysine; alternate => ECO:0000269|PubMed:31645732
source Swiss-Prot : SWS_FT_FI3

56) chain d
residue 82
type MOD_RES
sequence K
description N6-lactoyllysine; alternate => ECO:0000269|PubMed:31645732
source Swiss-Prot : SWS_FT_FI3

57) chain g
residue 95
type MOD_RES
sequence K
description ADP-ribosylserine => ECO:0000269|PubMed:34874266
source Swiss-Prot : SWS_FT_FI4

58) chain b
residue 44
type MOD_RES
sequence K
description N6-crotonyllysine; alternate => ECO:0000269|PubMed:21925322
source Swiss-Prot : SWS_FT_FI5

59) chain f
residue 44
type MOD_RES
sequence K
description N6-crotonyllysine; alternate => ECO:0000269|PubMed:21925322
source Swiss-Prot : SWS_FT_FI5

60) chain b
residue 77
type MOD_RES
sequence K
description Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
source Swiss-Prot : SWS_FT_FI6

61) chain b
residue 91
type MOD_RES
sequence K
description Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
source Swiss-Prot : SWS_FT_FI6

62) chain f
residue 31
type MOD_RES
sequence K
description Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
source Swiss-Prot : SWS_FT_FI6

63) chain f
residue 77
type MOD_RES
sequence K
description Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
source Swiss-Prot : SWS_FT_FI6

64) chain f
residue 91
type MOD_RES
sequence K
description Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
source Swiss-Prot : SWS_FT_FI6

65) chain g
residue 74
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000269|PubMed:24681537
source Swiss-Prot : SWS_FT_FI7

66) chain g
residue 75
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000269|PubMed:24681537
source Swiss-Prot : SWS_FT_FI7

67) chain d
residue 31
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

68) chain d
residue 113
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

69) chain d
residue 117
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

70) chain h
residue 31
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

71) chain h
residue 113
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

72) chain h
residue 117
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI8

73) chain d
residue 32
type MOD_RES
sequence E
description PolyADP-ribosyl glutamic acid => ECO:0000250|UniProtKB:Q64475
source Swiss-Prot : SWS_FT_FI9

74) chain h
residue 32
type MOD_RES
sequence E
description PolyADP-ribosyl glutamic acid => ECO:0000250|UniProtKB:Q64475
source Swiss-Prot : SWS_FT_FI9

75) chain g
residue 118
type MOD_RES
sequence K
description PolyADP-ribosyl glutamic acid => ECO:0000250|UniProtKB:Q64475
source Swiss-Prot : SWS_FT_FI9

76) chain d
residue 33
type MOD_RES
sequence S
description Phosphoserine; by AMPK => ECO:0000250|UniProtKB:Q64475
source Swiss-Prot : SWS_FT_FI10

77) chain h
residue 33
type MOD_RES
sequence S
description Phosphoserine; by AMPK => ECO:0000250|UniProtKB:Q64475
source Swiss-Prot : SWS_FT_FI10

78) chain B
residue 977-989
type prosite
sequence GDKFASRHGQKGT
description RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT
source prosite : PS01166

79) chain d
residue 89-111
type prosite
sequence REIQTAVRLLLPGELAKHAVSEG
description HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
source prosite : PS00357

80) chain E
residue 146-159
type prosite
sequence HELVPKHIRLSDGE
description RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPKHirLsdGE
source prosite : PS01110

81) chain C
residue 30-70
type prosite
sequence NSLRRTMLAEVPTLAIDLVEIKMNTSVLADEFISHRLGLI
P
description RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRtmlaevptlAidlVeikmNtSvlaDEfIShRLGLIP
source prosite : PS00446

82) chain F
residue 86-100
type prosite
sequence TKYERARILGTRALQ
description RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARiLGtRAlQ
source prosite : PS01111

83) chain I
residue 6-32
type prosite
sequence FCLECNNMLYPKEDKENQRLLYSCRNC
description RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FClECNNMLypkedkenqrllysCrnC
source prosite : PS01030

84) chain c
residue 21-27
type prosite
sequence AGLQFPV
description HISTONE_H2A Histone H2A signature. AGLqFPV
source prosite : PS00046

85) chain K
residue 35-66
type prosite
sequence FEREDHTLANLLREELALYPDVTFVAYKVEHP
description RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. FerEdHTLaNlLreeLalypdVtfvaYkveHP
source prosite : PS01154

86) chain a
residue 66-74
type prosite
sequence PFQRLVREI
description HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
source prosite : PS00959

87) chain J
residue 2-11
type prosite
sequence IIPVRCFSCG
description RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFSCG
source prosite : PS01112

88) chain a
residue 57
type MOD_RES
sequence S
description Phosphoserine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI21

89) chain e
residue 57
type MOD_RES
sequence S
description Phosphoserine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI21

90) chain a
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:29211711
source Swiss-Prot : SWS_FT_FI22

91) chain e
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:29211711
source Swiss-Prot : SWS_FT_FI22

92) chain a
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI23

93) chain e
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000269|PubMed:20850016
source Swiss-Prot : SWS_FT_FI23

94) chain a
residue 86
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI24

95) chain e
residue 86
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI24

96) chain a
residue 107
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI25

97) chain e
residue 107
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI25

98) chain a
residue 115
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI26

99) chain e
residue 115
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI26

100) chain a
residue 122
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:27436229
source Swiss-Prot : SWS_FT_FI27

101) chain e
residue 122
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:27436229
source Swiss-Prot : SWS_FT_FI27

102) chain d
residue 43
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000269|PubMed:16627869
source Swiss-Prot : SWS_FT_FI11

103) chain d
residue 105
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000269|PubMed:16627869
source Swiss-Prot : SWS_FT_FI11

104) chain h
residue 43
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000269|PubMed:16627869
source Swiss-Prot : SWS_FT_FI11

105) chain h
residue 105
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000269|PubMed:16627869
source Swiss-Prot : SWS_FT_FI11

106) chain d
residue 54
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine; alternate => ECO:0000269|PubMed:24681537
source Swiss-Prot : SWS_FT_FI12

107) chain h
residue 54
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine; alternate => ECO:0000269|PubMed:24681537
source Swiss-Prot : SWS_FT_FI12

108) chain d
residue 76
type MOD_RES
sequence R
description Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI13

109) chain h
residue 76
type MOD_RES
sequence R
description Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI13

110) chain e
residue 64
type MOD_RES
sequence K
description Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08
source Swiss-Prot : SWS_FT_FI13


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