eF-site ID 5zx3-F
PDB Code 5zx3
Chain F

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Title Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H
Classification TRANSCRIPTION
Compound DNA-directed RNA polymerase subunit alpha
Source (SIGH_MYCTU)
Sequence F:  DEELTARFERDAIPLLDQLYGGALRMTRNPADAEDLLQET
MVKAYAGFRSFKAWLYRILTNTYINSYRKKQRQPAEYPTE
QITDWQLASNAEHSSTGLRSAEVEALEALPDTEIKEALQA
LPEEFRMAVYYADVEGFPYKEIAEIMDTPIGTVMSRLHRG
RRQLRGLLADVAR
Description


Functional site

1) chain F
residue 54-85
type prosite
sequence AEDLLQETMVKAYAGFRSFKAWLYRI
description SIGMA70_ECF Sigma-70 factors ECF subfamily signature. AEDLLQeTMVkAYagfrsfrhgtnlk.AWLyrI
source prosite : PS01063

2) chain F
residue 166-185
type DNA_BIND
sequence YKEIAEIMDTPIGTVMSRLH
description H-T-H motif => ECO:0000250
source Swiss-Prot : SWS_FT_FI1


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