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eF-site ID
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5zx3-C |
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PDB Code
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5zx3 |
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Chain
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C |
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click to enlarge
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Title
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Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H |
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Classification
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TRANSCRIPTION |
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Compound
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DNA-directed RNA polymerase subunit alpha |
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Source
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(SIGH_MYCTU) |
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Sequence
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C: |
RPQSSSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFE
WLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGS
MSLSFSDPRFDDVKAPVDECKDKDMTYAAPLFVTAEFINN
NTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRS
PGVYFDETIDKSTDKTLHSVKVIPSRGAWLEFIDRKRRQP
VTVLLGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPP
TKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLTEEDV
VATIEYLVRLHEGQTTMTVPGGVEVPVETDDIDHFGNRRL
RTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLI
NIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSAL
GPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIG
SLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDR
HVVAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDY
MDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYI
TVMHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEA
GQVIADGPCTDDGEMALGKNLLVAIMPWEGHNYEDAIILS
NRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISD
EVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEE
RLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSREDE
DELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKI
LPVEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGW
CAHSGWKVDAAKGVPDWAARLPDELLEAQPNAIVSTPVFD
GAQEAELQGLLSCTLPNRDGDVLVDADGKAMLFDGRSGEP
FPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLG
GKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVG
RVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVL
SSDGAAIELREGEDEDLERAAANLG
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Description
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Functional site
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1)
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chain |
C |
| residue |
882-894 |
| type |
prosite |
| sequence |
GDKLAGRHGNKGV
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| description |
RNA_POL_BETA RNA polymerases beta chain signature. GdKLAGrHGNKGV
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| source |
prosite : PS01166
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