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eF-site ID
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5zx2-F |
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PDB Code
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5zx2 |
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Chain
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F |
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Title
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Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor sigma H and 7nt RNA |
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Classification
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TRANSCRIPTION/DNA/RNA |
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Compound
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DNA-directed RNA polymerase subunit alpha |
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Source
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(5ZX2) |
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Sequence
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F: |
DEELTARFERDAIPLLDQLYGGALRMTRNPADAEDLLQET
MVKAYAGFRSFRHGTNLKAWLYRILTNTYINSYRKKQRQP
AEYPTEQITDWQLASNAEHSSTGLRSAEVEALEALPDTEI
KEALQALPEEFRMAVYYADVEGFPYKEIAEIMDTPIGTVM
SRLHRGRRQLRGLLA
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Description
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Functional site
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1)
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chain |
F |
| residue |
54-85 |
| type |
prosite |
| sequence |
AEDLLQETMVKAYAGFRSFRHGTNLKAWLYRI
|
| description |
SIGMA70_ECF Sigma-70 factors ECF subfamily signature. AEDLLQeTMVkAYagfrsfrhgtnlk.AWLyrI
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| source |
prosite : PS01063
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2)
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chain |
F |
| residue |
166-185 |
| type |
DNA_BIND |
| sequence |
YKEIAEIMDTPIGTVMSRLH
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| description |
H-T-H motif => ECO:0000250
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| source |
Swiss-Prot : SWS_FT_FI1
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