|
eF-site ID
|
5zum-AB |
PDB Code
|
5zum |
Chain
|
A, B |
|
click to enlarge
|
|
Title
|
Structure of dipeptidyl-peptidase III from Corallococcus sp. strain EGB |
Classification
|
HYDROLASE |
Compound
|
dipeptidyl-peptidase III |
Source
|
(5ZUM) |
|
Sequence
|
A: |
RLPDAPTLKRXTARFAPVDVKVDVSKLPDAEKRALAKILQ
AAKIXDPLFLSQAWAGNPTLLLDLVEDTTPLGKERLHAFL
LNKGPWSRLDEAKPFIPGVPPKPDEGNFYPAGATKAEVEA
WVKSLPEAQQHAATGFFTTVRKGPDGKFLTVPYSVEYQGE
LGXAAKLLREAAALTQQSTLKRFLETRAEAFLSNDYYASE
VAWXELDASVEPTIGPYEVYEDGWFNYKAAFEAFIGVRDE
AETQKLAKFSAELQELENNLPIEPALRNPKLGALAPIRVI
NSLYSSGDGNRGVQTAAYNLPNDERVAAEKGTKRVXLKNI
QEAKFQRVLVPIAKVALPAKDRKDVSFDAFFTHILXHELX
HGLGPHNVTVAGKQTTVRQALQASSSAIEEAKADISGLWA
LQRLVDKGTLDKELQRTXYTTFLASAFRSIRFGIDEAHGK
GIALQLNHFLDTGAVKVNADGTFEVVPDKXQASVTSLTNQ
LXSLQAKGDRAAAEELLAKQGVVRPSVQKVLEKLKNVPVD
IEPRYVTAESLVK
|
B: |
RLPDAPTLKRXTARFAPVDVKVDVSKLPDAEKRALAKILQ
AAKIXDPLFLSQAWAGNPTLLLDLVEDTTPLGKERLHAFL
LNKGPWSRLDEAKPFIPGVPPKPDEGNFYPAGATKAEVEA
WVKSLPEAQQHAATGFFTTVRKGPDGKFLTVPYSVEYQGE
LGXAAKLLREAAALTQQSTLKRFLETRAEAFLSNDYYASE
VAWXELDASVEPTIGPYEVYEDGWFNYKAAFEAFIGVRDE
AETQKLAKFSAELQELENNLPIEPALRNPKLGALAPIRVI
NSLYSSGDGNRGVQTAAYNLPNDERVAAEKGTKRVXLKNI
QEAKFQRVLVPIAKVALPAKDRKDVSFDAFFTHILXHELX
HGLGPHNVTVAGKQTTVRQALQASSSAIEEAKADISGLWA
LQRLVDKGTLDKELQRTXYTTFLASAFRSIRFGIDEAHGK
GIALQLNHFLDTGAVKVNADGTFEVVPDKXQASVTSLTNQ
LXSLQAKGDRAAAEELLAKQGVVRPSVQKVLEKLKNVPVD
IEPRYVTAESLVKDFGA
|
|
Description
|
(1) |
dipeptidyl-peptidase III
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
384 |
type |
|
sequence |
H
|
description |
binding site for residue ZN A 601
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
388 |
type |
|
sequence |
H
|
description |
binding site for residue ZN A 601
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
417 |
type |
|
sequence |
E
|
description |
binding site for residue ZN A 601
|
source |
: AC1
|
|
4)
|
chain |
B |
residue |
384 |
type |
|
sequence |
H
|
description |
binding site for residue ZN B 601
|
source |
: AC2
|
|
5)
|
chain |
B |
residue |
388 |
type |
|
sequence |
H
|
description |
binding site for residue ZN B 601
|
source |
: AC2
|
|
6)
|
chain |
B |
residue |
417 |
type |
|
sequence |
E
|
description |
binding site for residue ZN B 601
|
source |
: AC2
|
|
7)
|
chain |
A |
residue |
381-390 |
type |
prosite |
sequence |
ILXHELXHGL
|
description |
ZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. ILMHELMHGL
|
source |
prosite : PS00142
|
|
|
|