eF-site ID 5znm-A
PDB Code 5znm
Chain A

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Title Colicin D Central Domain and C-terminal tRNase domain
Classification ANTIBIOTIC
Compound Colicin-D
Source (CEAD_ECOLX)
Sequence A:  MHEEAVARAEAEKAKAELFSKAGVNQPPVYTQEMMERANS
VMNEQGALVLNNTASSVQLAMTGTGVWTAAGDIAGNISKF
FSNALEKVTSPLLMRISLGANLEAMFSLSAQMLAGQGVVI
EPGATSVNLPVRGQLINSNGQLALDLLKTGNESIPAAVPV
LNAVRDTATGLDKITLPAVVGAPSRTILVNPVPQPSVPTD
TGNHQPVPVTPVHTGTEVKSVEMPVDVGGLRDFIYWRPDA
AGTGVEAVYVMLNDPLDSGRFSRKQLDKKYKHAGDFGISD
TKKNRETLTKFRDAIEEHLSDKDTVEKGTYRREKGSKVYF
NPNTMNVVIIKSNGEFLSGWKINPDADNGRIYLETGEL
Description


Functional site

1) chain A
residue 608
type
sequence K
description binding site for residue SO4 A 701
source : AC1

2) chain A
residue 610
type
sequence K
description binding site for residue SO4 A 701
source : AC1

3) chain A
residue 610
type
sequence K
description binding site for residue SO4 A 701
source : AC1

4) chain A
residue 611
type
sequence H
description binding site for residue SO4 A 701
source : AC1

5) chain A
residue 677
type
sequence S
description binding site for residue SO4 A 701
source : AC1

6) chain A
residue 531
type
sequence T
description binding site for residue SO4 A 702
source : AC2

7) chain A
residue 536
type
sequence H
description binding site for residue SO4 A 702
source : AC2

8) chain A
residue 604
type
sequence Q
description binding site for residue SO4 A 703
source : AC3

9) chain A
residue 607
type
sequence K
description binding site for residue SO4 A 703
source : AC3

10) chain A
residue 608
type
sequence K
description binding site for residue SO4 A 703
source : AC3

11) chain A
residue 676
type
sequence L
description binding site for residue SO4 A 703
source : AC3

12) chain A
residue 637
type
sequence H
description binding site for residue GOL A 704
source : AC4

13) chain A
residue 640
type
sequence D
description binding site for residue GOL A 704
source : AC4

14) chain A
residue 660
type
sequence N
description binding site for residue GOL A 704
source : AC4

15) chain A
residue 636
type
sequence E
description binding site for residue GOL A 705
source : AC5

16) chain A
residue 659
type
sequence F
description binding site for residue GOL A 706
source : AC6

17) chain A
residue 661
type
sequence P
description binding site for residue GOL A 706
source : AC6

18) chain A
residue 693
type
sequence E
description binding site for residue GOL A 706
source : AC6

19) chain A
residue 493
type
sequence L
description binding site for residue GOL A 708
source : AC8

20) chain A
residue 494
type
sequence N
description binding site for residue GOL A 708
source : AC8

21) chain A
residue 334
type
sequence V
description binding site for residue GOL A 710
source : AD1

22) chain A
residue 335
type
sequence N
description binding site for residue GOL A 710
source : AD1

23) chain A
residue 362
type
sequence N
description binding site for residue GOL A 710
source : AD1

24) chain A
residue 504
type
sequence D
description binding site for residue GOL A 710
source : AD1

25) chain A
residue 574
type
sequence Y
description binding site for residue GOL A 710
source : AD1

26) chain A
residue 575
type
sequence W
description binding site for residue GOL A 710
source : AD1

27) chain A
residue 498
type
sequence D
description binding site for residue GOL A 711
source : AD2

28) chain A
residue 501
type
sequence T
description binding site for residue GOL A 711
source : AD2

29) chain A
residue 505
type
sequence K
description binding site for residue GOL A 711
source : AD2

30) chain A
residue 520
type
sequence L
description binding site for residue GOL A 711
source : AD2

31) chain A
residue 317
type
sequence A
description binding site for residue GOL B 705
source : AD7

32) chain A
residue 320
type
sequence E
description binding site for residue GOL B 705
source : AD7

33) chain A
residue 321
type
sequence A
description binding site for residue GOL B 705
source : AD7

34) chain A
residue 505
type
sequence K
description binding site for residue GOL B 706
source : AD8


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