eF-site ID 5zhx-h
PDB Code 5zhx
Chain h

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Title Crystal structure of SmgGDS-558 and farnesylated RhoA complex
Classification ONCOPROTEIN
Compound Rap1 GTPase-GDP dissociation stimulator 1
Source (RHOA_HUMAN)
Sequence h:  AIRKKLVIVGDGACGKTCLLIVFSKENYVADIEVDGKQVE
LALWDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT
PEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVK
PEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ
ACL
Description (1)  Rap1 GTPase-GDP dissociation stimulator 1


Functional site

1) chain h
residue 191
type
sequence L
description binding site for Di-peptide FAR h 201 and CYS h 190
source : AC4

2) chain h
residue 190
type LIPID
sequence C
description S-geranylgeranyl cysteine => ECO:0000250|UniProtKB:P61585
source Swiss-Prot : SWS_FT_FI11

3) chain h
residue 12
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:10748207, ECO:0000269|PubMed:12777804
source Swiss-Prot : SWS_FT_FI1

4) chain h
residue 117
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:10748207, ECO:0000269|PubMed:12777804
source Swiss-Prot : SWS_FT_FI1

5) chain h
residue 160
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:P62820
source Swiss-Prot : SWS_FT_FI2

6) chain h
residue 41
type MOD_RES
sequence N
description (Microbial infection) ADP-ribosylasparagine; by botulinum toxin => ECO:0000305|PubMed:1328215
source Swiss-Prot : SWS_FT_FI6

7) chain h
residue 190
type MOD_RES
sequence C
description Cysteine methyl ester => ECO:0000250|UniProtKB:P61585
source Swiss-Prot : SWS_FT_FI9

8) chain h
residue 135
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:23871831
source Swiss-Prot : SWS_FT_FI14


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