eF-site ID 5zhx-g
PDB Code 5zhx
Chain g

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Title Crystal structure of SmgGDS-558 and farnesylated RhoA complex
Classification ONCOPROTEIN
Compound Rap1 GTPase-GDP dissociation stimulator 1
Source (RHOA_HUMAN)
Sequence g:  AIRKKLVIVGENYVADIEVDGKQVELALWDYDRLRPLSYP
DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV
GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFG
YMECSAKTKDGVREVFEMATRAALQARRGKKKSGCL
Description (1)  Rap1 GTPase-GDP dissociation stimulator 1


Functional site

1) chain g
residue 189
type
sequence G
description binding site for Di-peptide FAR g 201 and CYS g 190
source : AC3

2) chain g
residue 191
type
sequence L
description binding site for Di-peptide FAR g 201 and CYS g 190
source : AC3

3) chain g
residue 185
type LIPID
sequence K
description (Microbial infection) N6-stearoyl lysine => ECO:0000269|PubMed:30061757
source Swiss-Prot : SWS_FT_FI10

4) chain g
residue 186
type LIPID
sequence K
description (Microbial infection) N6-stearoyl lysine => ECO:0000269|PubMed:30061757
source Swiss-Prot : SWS_FT_FI10

5) chain g
residue 187
type LIPID
sequence K
description (Microbial infection) N6-stearoyl lysine => ECO:0000269|PubMed:30061757
source Swiss-Prot : SWS_FT_FI10

6) chain g
residue 190
type LIPID
sequence C
description S-geranylgeranyl cysteine => ECO:0000250|UniProtKB:P61585
source Swiss-Prot : SWS_FT_FI11

7) chain g
residue 12
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:10748207, ECO:0000269|PubMed:12777804
source Swiss-Prot : SWS_FT_FI1

8) chain g
residue 117
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:10748207, ECO:0000269|PubMed:12777804
source Swiss-Prot : SWS_FT_FI1

9) chain g
residue 160
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:P62820
source Swiss-Prot : SWS_FT_FI2

10) chain g
residue 189
type SITE
sequence G
description (Microbial infection) Cleavage; by yopT => ECO:0000269|PubMed:12062101, ECO:0000269|PubMed:12538863
source Swiss-Prot : SWS_FT_FI3

11) chain g
residue 41
type MOD_RES
sequence N
description (Microbial infection) ADP-ribosylasparagine; by botulinum toxin => ECO:0000305|PubMed:1328215
source Swiss-Prot : SWS_FT_FI6

12) chain g
residue 188
type MOD_RES
sequence S
description Phosphoserine; by PKG/PRKG1 => ECO:0000269|PubMed:11162591
source Swiss-Prot : SWS_FT_FI8

13) chain g
residue 190
type MOD_RES
sequence C
description Cysteine methyl ester => ECO:0000250|UniProtKB:P61585
source Swiss-Prot : SWS_FT_FI9

14) chain g
residue 135
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:23871831
source Swiss-Prot : SWS_FT_FI14


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