eF-site ID 5zge-A
PDB Code 5zge
Chain A

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Title Crystal structure of NDM-1 at pH5.5 (Bis-Tris) in complex with hydrolyzed ampicillin
Classification HYDROLASE/ANTIBIOTIC
Compound Metallo-beta-lactamase type 2
Source (BLAN1_KLEPN)
Sequence A:  EIRPTIGQQMETGDQRFGDLVFRQLAPNVWQHTSYLDMPG
FGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEI
NLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLA
PQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGH
TSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHY
AASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKL
R
Description


Functional site

1) chain A
residue 65
type
sequence L
description binding site for residue ZZ7 A 301
source : AC1

2) chain A
residue 67
type
sequence M
description binding site for residue ZZ7 A 301
source : AC1

3) chain A
residue 93
type
sequence W
description binding site for residue ZZ7 A 301
source : AC1

4) chain A
residue 122
type
sequence H
description binding site for residue ZZ7 A 301
source : AC1

5) chain A
residue 123
type
sequence Q
description binding site for residue ZZ7 A 301
source : AC1

6) chain A
residue 124
type
sequence D
description binding site for residue ZZ7 A 301
source : AC1

7) chain A
residue 189
type
sequence H
description binding site for residue ZZ7 A 301
source : AC1

8) chain A
residue 208
type
sequence C
description binding site for residue ZZ7 A 301
source : AC1

9) chain A
residue 211
type
sequence K
description binding site for residue ZZ7 A 301
source : AC1

10) chain A
residue 219
type
sequence G
description binding site for residue ZZ7 A 301
source : AC1

11) chain A
residue 220
type
sequence N
description binding site for residue ZZ7 A 301
source : AC1

12) chain A
residue 250
type
sequence H
description binding site for residue ZZ7 A 301
source : AC1

13) chain A
residue 120
type
sequence H
description binding site for residue ZN A 302
source : AC2

14) chain A
residue 122
type
sequence H
description binding site for residue ZN A 302
source : AC2

15) chain A
residue 189
type
sequence H
description binding site for residue ZN A 302
source : AC2

16) chain A
residue 124
type
sequence D
description binding site for residue ZN A 303
source : AC3

17) chain A
residue 208
type
sequence C
description binding site for residue ZN A 303
source : AC3

18) chain A
residue 250
type
sequence H
description binding site for residue ZN A 303
source : AC3

19) chain A
residue 120
type
sequence H
description binding site for residue OH A 304
source : AC4

20) chain A
residue 122
type
sequence H
description binding site for residue OH A 304
source : AC4

21) chain A
residue 124
type
sequence D
description binding site for residue OH A 304
source : AC4

22) chain A
residue 189
type
sequence H
description binding site for residue OH A 304
source : AC4

23) chain A
residue 208
type
sequence C
description binding site for residue OH A 304
source : AC4

24) chain A
residue 34
type
sequence T
description binding site for residue ZZ7 B 302
source : AC6

25) chain A
residue 68
type
sequence P
description binding site for residue ZZ7 B 302
source : AC6

26) chain A
residue 69
type
sequence G
description binding site for residue ZZ7 B 302
source : AC6

27) chain A
residue 120
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

28) chain A
residue 122
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

29) chain A
residue 124
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

30) chain A
residue 189
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 208
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 250
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 211
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:22713171
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 220
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:22713171
source Swiss-Prot : SWS_FT_FI2


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