eF-site ID 5zba-ABCD
PDB Code 5zba
Chain A, B, C, D

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Title Crystal structure of Rtt109-Asf1-H3-H4-CoA complex
Classification TRANSFERASE/STRUCTURAL PROTEIN
Compound DNA damage response protein Rtt109, putative
Source (H4_YEAST)
Sequence A:  DLGDSLAKVLPTGVKVTIRHISSAPSPCVALFAAPPGEEP
ESTFCENHFLAVSISPNENEESEVIIFGIEVLVYGTAHLT
TIFVSKADSTGYLHLLKNAPKVSLLRLISNAFLSFLVQTH
QRPGVRLMVSLFARAQNQYLFPGSIENPEKHVLDDRGLIK
WWCRVIDPILREYEPETKSSATAFLIVPGCDKFETRGFFP
ITARSDGKDRPRWLNSYPLHQLCDNPNAPPRCLVPRFPDD
PXTRFLIDLDDELPNSGHWRSVKSLAQFWEMMSFRQECSA
GRLVGFLWLVINPPFFWPDTGRGHAVLSEEDYKAAINFLI
DQDFNTKHKAIASTKAWAEKVASLADQLWVGQRVEGRNAT
B:  MSVVSLLGVKIVNNPAPFLAPYQFEITFECLEQLQKDLEW
KLTYVGSATSSEYDQELDSLLVGPIPVGVNKFLFEADAPD
LKRIPTSEILGVTVILLTCSYDGREFVRVGYYVNNEYDSE
ELTQDPPAKPIIERIRRNILAEKPRVTRFAIKWD
C:  KPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTD
LRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQK
KDIKLARRLRGER
D:  ILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKS
FLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGF
G
Description


Functional site

1) chain A
residue 93
type
sequence A
description binding site for residue COA A 601
source : AC1

2) chain A
residue 94
type
sequence D
description binding site for residue COA A 601
source : AC1

3) chain A
residue 95
type
sequence S
description binding site for residue COA A 601
source : AC1

4) chain A
residue 109
type
sequence S
description binding site for residue COA A 601
source : AC1

5) chain A
residue 110
type
sequence L
description binding site for residue COA A 601
source : AC1

6) chain A
residue 111
type
sequence L
description binding site for residue COA A 601
source : AC1

7) chain A
residue 112
type
sequence R
description binding site for residue COA A 601
source : AC1

8) chain A
residue 142
type
sequence Q
description binding site for residue COA A 601
source : AC1

9) chain A
residue 143
type
sequence N
description binding site for residue COA A 601
source : AC1

10) chain A
residue 145
type
sequence Y
description binding site for residue COA A 601
source : AC1

11) chain A
residue 157
type
sequence H
description binding site for residue COA A 601
source : AC1

12) chain A
residue 164
type
sequence L
description binding site for residue COA A 601
source : AC1

13) chain A
residue 167
type
sequence W
description binding site for residue COA A 601
source : AC1

14) chain A
residue 168
type
sequence W
description binding site for residue COA A 601
source : AC1

15) chain A
residue 170
type
sequence R
description binding site for residue COA A 601
source : AC1

16) chain A
residue 236
type
sequence N
description binding site for residue IOD A 603
source : AC2

17) chain A
residue 296
type
sequence L
description binding site for residue IOD A 604
source : AC3

18) chain A
residue 100
type
sequence H
description binding site for residue IOD A 606
source : AC4

19) chain A
residue 162
type
sequence R
description binding site for residue IOD A 608
source : AC5

20) chain A
residue 215
type
sequence E
description binding site for residue IOD A 608
source : AC5

21) chain D
residue 95
type
sequence R
description binding site for residue IOD A 608
source : AC5

22) chain A
residue 242
type
sequence Q
description binding site for residue IOD A 609
source : AC6

23) chain A
residue 112
type
sequence R
description binding site for residue IOD A 610
source : AC7

24) chain A
residue 116
type
sequence N
description binding site for residue IOD A 610
source : AC7

25) chain C
residue 57
type
sequence S
description binding site for residue IOD A 614
source : AC8

26) chain A
residue 76
type
sequence E
description binding site for residue IOD A 615
source : AC9

27) chain A
residue 424
type
sequence K
description binding site for residue IOD A 615
source : AC9

28) chain A
residue 161
type
sequence D
description binding site for residue IOD A 617
source : AD1

29) chain A
residue 313
type
sequence R
description binding site for residue IOD A 617
source : AD1

30) chain A
residue 128
type
sequence R
description binding site for residue IOD A 618
source : AD2

31) chain B
residue 6
type
sequence L
description binding site for residue IOD B 201
source : AD3

32) chain C
residue 84
type
sequence F
description binding site for residue IOD C 201
source : AD4

33) chain C
residue 125
type
sequence K
description binding site for residue IOD C 202
source : AD5

34) chain C
residue 64
type
sequence K
description binding site for residue IOD C 204
source : AD6

35) chain C
residue 64
type
sequence K
description binding site for residue IOD C 204
source : AD6

36) chain C
residue 86
type
sequence S
description binding site for residue IOD C 205
source : AD7

37) chain C
residue 117
type
sequence V
description binding site for residue IOD C 207
source : AD8

38) chain C
residue 55
type
sequence Q
description binding site for residue IOD C 208
source : AD9

39) chain C
residue 56
type
sequence K
description binding site for residue IOD C 209
source : AE1

40) chain D
residue 47
type
sequence S
description binding site for residue IOD C 210
source : AE2

41) chain C
residue 53
type
sequence R
description binding site for residue IOD C 211
source : AE3

42) chain C
residue 53
type
sequence R
description binding site for residue IOD C 212
source : AE4

43) chain D
residue 35
type
sequence R
description binding site for residue IOD C 212
source : AE4

44) chain C
residue 128
type
sequence R
description binding site for residue IOD C 213
source : AE5

45) chain C
residue 63
type
sequence R
description binding site for residue IOD D 201
source : AE6

46) chain D
residue 30
type
sequence T
description binding site for residue IOD D 201
source : AE6

47) chain C
residue 121
type
sequence K
description binding site for residue IOD D 203
source : AE7

48) chain D
residue 47
type
sequence S
description binding site for residue IOD D 203
source : AE7

49) chain D
residue 49
type
sequence L
description binding site for residue IOD D 203
source : AE7

50) chain C
residue 49
type
sequence R
description binding site for residue IOD D 205
source : AE8

51) chain D
residue 60
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI6

52) chain C
residue 66-74
type prosite
sequence PFQRLVREI
description HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
source prosite : PS00959

53) chain D
residue 79
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:16768447
source Swiss-Prot : SWS_FT_FI8

54) chain D
residue 91
type MOD_RES
sequence K
description N6-glutaryllysine => ECO:0000269|PubMed:31542297
source Swiss-Prot : SWS_FT_FI9

55) chain D
residue 31
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI4

56) chain D
residue 77
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:22389435
source Swiss-Prot : SWS_FT_FI4

57) chain D
residue 55
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000269|PubMed:19113941
source Swiss-Prot : SWS_FT_FI5

58) chain C
residue 56
type MOD_RES
sequence K
description Omega-N-methylarginine => ECO:0000269|PubMed:19113941
source Swiss-Prot : SWS_FT_FI5

59) chain D
residue 64
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI7


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