|
eF-site ID
|
5z6w-ABCH |
PDB Code
|
5z6w |
Chain
|
A, B, C, H |
|
click to enlarge
|
|
Title
|
Crystal structure of paFAN1 bound to 2nt 5'flap DNA with gap with Manganese |
Classification
|
HYDROLASE/DNA |
Compound
|
Fanconi-associated nuclease 1 homolog |
Source
|
null (5Z6W) |
|
Sequence
|
A: |
PALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFA
ELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQP
LLALGWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANL
RKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCD
RLRLMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFR
LRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPW
LEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLR
AIRSLERGERFAEAHALAREASCAPESDAERQGLARLLPR
LQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVRE
HLEEPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHP
FHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCR
YRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFER
LLEDIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDN
QLRWLQFCREREMPVAVCYVRWHVDD
|
B: |
ATTCAA
|
C: |
GAATGTGTCTCAATCCCAACTT
|
H: |
GTTGGGATTG
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
386 |
type |
|
sequence |
E
|
description |
binding site for residue MN A 601
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
507 |
type |
|
sequence |
D
|
description |
binding site for residue MN A 601
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
507 |
type |
|
sequence |
D
|
description |
binding site for residue MN A 602
|
source |
: AC2
|
|
4)
|
chain |
A |
residue |
522 |
type |
|
sequence |
E
|
description |
binding site for residue MN A 602
|
source |
: AC2
|
|
5)
|
chain |
A |
residue |
523 |
type |
|
sequence |
V
|
description |
binding site for residue MN A 602
|
source |
: AC2
|
|
6)
|
chain |
A |
residue |
522 |
type |
BINDING |
sequence |
E
|
description |
BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
7)
|
chain |
A |
residue |
523 |
type |
BINDING |
sequence |
V
|
description |
BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
8)
|
chain |
A |
residue |
386 |
type |
BINDING |
sequence |
E
|
description |
BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
9)
|
chain |
A |
residue |
507 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|