eF-site ID 5z1a-A
PDB Code 5z1a
Chain A

click to enlarge
Title The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
Classification HYDROLASE
Compound Putative beta-galactosidase
Source (Q5LIC7_BACFN)
Sequence A:  SLRQDILLNNNWNFRFSHQVQGDTRRVDLPHTWNAQDALA
GKIDYKRGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADV
FINRKHIGEHRGGYGAFIFEITDLVKYGEKNSVLVRANNG
EQLDIMPLVGDFNFYGGIYRDVHLLITDETCISPLDYASP
GVYLVQEVVSPQEAKVCAKVNLSNRAADGTAELQVLVTDG
TKVICKESRNVSLKQGADILEQLPLLIQKPRLWNGCEDPF
MYQVSISLHKDGKQIDSVTQPLGLRYYHTDPDKGFFLNGK
HLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAI
RLAHYPQATYMYDLMDKHGIVTWAEIPFVGPGGYADKGFV
DQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEVGD
NPVEYVKELNALAKQEDPTRPTTSASNQDGNLNFITENIA
WNRYDGWYGSTPKTLATFLDRTHKKHPELRIGISEYGAGA
SIYHQQDSLKQPSASGWWHPENWQTYYHMENWKIIAERPF
VWGTFVWNMFDFGAAHRTEGDRPGINDKGLVTFDRKVRKD
AFYFYKANWNKQEPMIYLAEKRCRLRYQPEQTFMAFTTAP
EAELFVNGVSCGKQKADTYSTVVWKNVKLTSGENIIRVTT
PGKKPLTDEVTVEYK
Description


Functional site

1) chain A
residue 166
type
sequence D
description binding site for residue SJ5 A 701
source : AC1

2) chain A
residue 359
type
sequence H
description binding site for residue SJ5 A 701
source : AC1

3) chain A
residue 429
type
sequence E
description binding site for residue SJ5 A 701
source : AC1

4) chain A
residue 479
type
sequence Y
description binding site for residue SJ5 A 701
source : AC1

5) chain A
residue 483
type
sequence Y
description binding site for residue SJ5 A 701
source : AC1

6) chain A
residue 510
type
sequence E
description binding site for residue SJ5 A 701
source : AC1

7) chain A
residue 562
type
sequence W
description binding site for residue SJ5 A 701
source : AC1

8) chain A
residue 567
type
sequence F
description binding site for residue SJ5 A 701
source : AC1

9) chain A
residue 572
type
sequence R
description binding site for residue SJ5 A 701
source : AC1

10) chain A
residue 581
type
sequence N
description binding site for residue SJ5 A 701
source : AC1

11) chain A
residue 583
type
sequence K
description binding site for residue SJ5 A 701
source : AC1

12) chain A
residue 429
type ACT_SITE
sequence E
description Proton donor => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 428
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 477
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 483
type BINDING
sequence Y
description BINDING => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 562
type BINDING
sequence W
description BINDING => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 583
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:P05804
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links