eF-site ID 5yyc-A
PDB Code 5yyc
Chain A

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Title Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4)
Classification ISOMERASE
Compound Alanine racemase
Source (D3FSP1_BACPE)
Sequence A:  MKTSSFRNTYAQISLQALKENAASFKASLQSPACRLMAVV
KGDGYGHGAVAAASSALNGGADYLGVAILDEAIELRDAGV
EAPILVLGYTSPHALREAISRNITLTVFSTDVRDALLEVA
SEAESPIKVHIKTETGMGRVGVQTKEELLDVMTPLYHHNN
IEVEGIFTHFAEADNLQSTYTDEQFARFLSFIEAIEKDDM
HVPIKHCCNSAGTLFHKDKHLDMVRVGISLYGLRPDVSLE
FPIELTQAMRLFSSIVSLRKLPEGSSISYGRTHKLSSEKV
VATMPIGYADGLSRALSNKGFVTLHGQKAPILGRVCMDQT
MIDVTDIPDAALGDHVEFPIDEMAELTGTINYEIVCAVSK
RVPRYYEE
Description (1)  Alanine racemase (E.C.5.1.1.1)


Functional site

1) chain A
residue 41
type
sequence K
description binding site for residue PLP A 401
source : AC1

2) chain A
residue 45
type
sequence Y
description binding site for residue PLP A 401
source : AC1

3) chain A
residue 139
type
sequence R
description binding site for residue PLP A 401
source : AC1

4) chain A
residue 169
type
sequence H
description binding site for residue PLP A 401
source : AC1

5) chain A
residue 209
type
sequence N
description binding site for residue PLP A 401
source : AC1

6) chain A
residue 210
type
sequence S
description binding site for residue PLP A 401
source : AC1

7) chain A
residue 225
type
sequence R
description binding site for residue PLP A 401
source : AC1

8) chain A
residue 227
type
sequence G
description binding site for residue PLP A 401
source : AC1

9) chain A
residue 228
type
sequence I
description binding site for residue PLP A 401
source : AC1

10) chain A
residue 352
type
sequence Y
description binding site for residue PLP A 401
source : AC1

11) chain A
residue 318
type
sequence D
description binding site for Di-peptide PLP C 401 and LYS C 41
source : AC2

12) chain A
residue 38-48
type prosite
sequence AVVKGDGYGHG
description ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKGDGYGHG
source prosite : PS00395


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