eF-site ID 5yq7-L
PDB Code 5yq7
Chain L

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence L:  SAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEE
FYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIIGII
LGVAFYLYEGVVNEGTLNILAMRIEPPPVSQGLNVDPAQP
GFFWFLTMVAATIAFVGWLLRQIDISLKLDMGMEVPIAFG
AVVSSWITLQWLRPIAMGAWGHGFPLGITHHLDWVSNIGY
QYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEAKRNI
SDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLC
IFLSGTFVKDWNAFWGFWDKMPIWNGVGQ
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain L
residue 167
type
sequence W
description binding site for residue BCL L 1001
source : AC7

2) chain L
residue 185
type
sequence F
description binding site for residue BCL L 1001
source : AC7

3) chain L
residue 192
type
sequence H
description binding site for residue BCL L 1001
source : AC7

4) chain L
residue 193
type
sequence L
description binding site for residue BCL L 1001
source : AC7

5) chain L
residue 136
type
sequence F
description binding site for residue BCL L 1002
source : AC8

6) chain L
residue 163
type
sequence V
description binding site for residue BCL L 1002
source : AC8

7) chain L
residue 206
type
sequence F
description binding site for residue BCL L 1002
source : AC8

8) chain L
residue 207
type
sequence F
description binding site for residue BCL L 1002
source : AC8

9) chain L
residue 212
type
sequence H
description binding site for residue BCL L 1002
source : AC8

10) chain L
residue 216
type
sequence I
description binding site for residue BCL L 1002
source : AC8

11) chain L
residue 275
type
sequence V
description binding site for residue BCL L 1002
source : AC8

12) chain L
residue 278
type
sequence S
description binding site for residue BCL L 1002
source : AC8

13) chain L
residue 279
type
sequence N
description binding site for residue BCL L 1002
source : AC8

14) chain L
residue 282
type
sequence I
description binding site for residue BCL L 1002
source : AC8

15) chain L
residue 80
type
sequence I
description binding site for residue BPH L 1003
source : AC9

16) chain L
residue 84
type
sequence V
description binding site for residue BPH L 1003
source : AC9

17) chain L
residue 139
type
sequence W
description binding site for residue BPH L 1003
source : AC9

18) chain L
residue 143
type
sequence Q
description binding site for residue BPH L 1003
source : AC9

19) chain L
residue 159
type
sequence A
description binding site for residue BPH L 1003
source : AC9

20) chain L
residue 160
type
sequence F
description binding site for residue BPH L 1003
source : AC9

21) chain L
residue 187
type
sequence L
description binding site for residue BPH L 1003
source : AC9

22) chain L
residue 189
type
sequence I
description binding site for residue BPH L 1003
source : AC9

23) chain L
residue 271
type
sequence G
description binding site for residue BPH L 1003
source : AC9

24) chain L
residue 225
type
sequence F
description binding site for residue MQE L 1004
source : AD1

25) chain L
residue 247
type
sequence H
description binding site for residue MQE L 1004
source : AD1

26) chain L
residue 250
type
sequence W
description binding site for residue MQE L 1004
source : AD1

27) chain L
residue 257
type
sequence S
description binding site for residue MQE L 1004
source : AD1

28) chain L
residue 258
type
sequence I
description binding site for residue MQE L 1004
source : AD1

29) chain L
residue 259
type
sequence G
description binding site for residue MQE L 1004
source : AD1

30) chain L
residue 260
type
sequence E
description binding site for residue MQE L 1004
source : AD1

31) chain L
residue 261
type
sequence I
description binding site for residue MQE L 1004
source : AD1

32) chain L
residue 266
type
sequence V
description binding site for residue MQE L 1004
source : AD1

33) chain L
residue 269
type
sequence W
description binding site for residue MQE L 1004
source : AD1

34) chain L
residue 229
type
sequence H
description binding site for residue FE L 1005
source : AD2

35) chain L
residue 264
type
sequence H
description binding site for residue FE L 1005
source : AD2

36) chain L
residue 204
type
sequence Y
description binding site for residue HEM C 503
source : AE4

37) chain L
residue 55
type
sequence F
description binding site for residue BCL T 103
source : AF7

38) chain L
residue 67
type
sequence F
description binding site for residue MQE M 701
source : AI3

39) chain L
residue 77
type
sequence I
description binding site for residue MQE M 701
source : AI3

40) chain L
residue 81
type
sequence I
description binding site for residue MQE M 701
source : AI3

41) chain L
residue 84
type
sequence V
description binding site for residue MQE M 701
source : AI3

42) chain L
residue 88
type
sequence L
description binding site for residue MQE M 701
source : AI3

43) chain L
residue 142
type
sequence R
description binding site for residue MQE M 701
source : AI3

44) chain L
residue 220
type
sequence F
description binding site for residue BCL M 702
source : AI4

45) chain L
residue 213
type
sequence A
description binding site for residue BPH M 703
source : AI5

46) chain L
residue 216
type
sequence I
description binding site for residue BPH M 703
source : AI5

47) chain L
residue 217
type
sequence T
description binding site for residue BPH M 703
source : AI5

48) chain L
residue 220
type
sequence F
description binding site for residue BPH M 704
source : AI6

49) chain L
residue 223
type
sequence T
description binding site for residue BPH M 704
source : AI6

50) chain L
residue 224
type
sequence L
description binding site for residue BPH M 704
source : AI6

51) chain L
residue 227
type
sequence H
description binding site for residue BPH M 704
source : AI6

52) chain L
residue 228
type
sequence M
description binding site for residue BPH M 704
source : AI6

53) chain L
residue 254
type
sequence L
description binding site for residue BPH M 704
source : AI6

54) chain L
residue 78
type
sequence I
description binding site for residues BCL S 101 and BCL R 102
source : AK2


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