eF-site ID 5yq7-C
PDB Code 5yq7
Chain C

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence C:  RGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQN
PIYVNYTQEPTDYISAESLAAMNAYIQANPQPQAVQVLKG
MTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNA
AKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHN
GKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKD
VSNHEVEQNQFAMYHMNVSMGQGCTFCHNARYFPSYEIAQ
KNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLC
HQGANIPPGAAKP
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain C
residue 91
type
sequence V
description binding site for residue HEM C 501
source : AE3

2) chain C
residue 93
type
sequence V
description binding site for residue HEM C 501
source : AE3

3) chain C
residue 94
type
sequence L
description binding site for residue HEM C 501
source : AE3

4) chain C
residue 106
type
sequence M
description binding site for residue HEM C 501
source : AE3

5) chain C
residue 107
type
sequence V
description binding site for residue HEM C 501
source : AE3

6) chain C
residue 110
type
sequence V
description binding site for residue HEM C 501
source : AE3

7) chain C
residue 118
type
sequence C
description binding site for residue HEM C 501
source : AE3

8) chain C
residue 121
type
sequence C
description binding site for residue HEM C 501
source : AE3

9) chain C
residue 122
type
sequence H
description binding site for residue HEM C 501
source : AE3

10) chain C
residue 128
type
sequence A
description binding site for residue HEM C 501
source : AE3

11) chain C
residue 143
type
sequence R
description binding site for residue HEM C 501
source : AE3

12) chain C
residue 205
type
sequence Y
description binding site for residue HEM C 503
source : AE4

13) chain C
residue 207
type
sequence G
description binding site for residue HEM C 503
source : AE4

14) chain C
residue 208
type
sequence G
description binding site for residue HEM C 503
source : AE4

15) chain C
residue 209
type
sequence L
description binding site for residue HEM C 503
source : AE4

16) chain C
residue 210
type
sequence V
description binding site for residue HEM C 503
source : AE4

17) chain C
residue 211
type
sequence V
description binding site for residue HEM C 503
source : AE4

18) chain C
residue 212
type
sequence T
description binding site for residue HEM C 503
source : AE4

19) chain C
residue 229
type
sequence M
description binding site for residue HEM C 503
source : AE4

20) chain C
residue 240
type
sequence C
description binding site for residue HEM C 503
source : AE4

21) chain C
residue 244
type
sequence H
description binding site for residue HEM C 503
source : AE4

22) chain C
residue 250
type
sequence P
description binding site for residue HEM C 503
source : AE4

23) chain C
residue 261
type
sequence I
description binding site for residue HEM C 503
source : AE4

24) chain C
residue 165
type
sequence G
description binding site for residue HEM C 504
source : AE5

25) chain C
residue 166
type
sequence G
description binding site for residue HEM C 504
source : AE5

26) chain C
residue 167
type
sequence Y
description binding site for residue HEM C 504
source : AE5

27) chain C
residue 169
type
sequence I
description binding site for residue HEM C 504
source : AE5

28) chain C
residue 174
type
sequence C
description binding site for residue HEM C 504
source : AE5

29) chain C
residue 232
type
sequence M
description binding site for residue HEM C 504
source : AE5

30) chain C
residue 256
type
sequence Q
description binding site for residue HEM C 504
source : AE5

31) chain C
residue 259
type
sequence H
description binding site for residue HEM C 504
source : AE5

32) chain C
residue 263
type
sequence M
description binding site for residue HEM C 504
source : AE5

33) chain C
residue 293
type
sequence C
description binding site for residue HEM C 504
source : AE5

34) chain C
residue 297
type
sequence H
description binding site for residue HEM C 504
source : AE5

35) chain C
residue 301
type
sequence N
description binding site for residue HEM C 504
source : AE5

36) chain C
residue 302
type
sequence I
description binding site for residue HEM C 504
source : AE5

37) chain C
residue 120
type
sequence Y
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

38) chain C
residue 145
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

39) chain C
residue 148
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

40) chain C
residue 170
type
sequence T
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

41) chain C
residue 172
type
sequence A
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

42) chain C
residue 173
type
sequence T
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

43) chain C
residue 174
type
sequence C
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

44) chain C
residue 175
type
sequence H
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

45) chain C
residue 181
type
sequence G
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

46) chain C
residue 182
type
sequence L
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

47) chain C
residue 285
type
sequence I
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

48) chain C
residue 286
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ5

49) chain C
residue 120
type
sequence Y
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

50) chain C
residue 145
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

51) chain C
residue 148
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

52) chain C
residue 170
type
sequence T
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

53) chain C
residue 172
type
sequence A
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

54) chain C
residue 173
type
sequence T
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

55) chain C
residue 174
type
sequence C
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

56) chain C
residue 175
type
sequence H
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

57) chain C
residue 181
type
sequence G
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

58) chain C
residue 182
type
sequence L
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

59) chain C
residue 285
type
sequence I
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6

60) chain C
residue 286
type
sequence M
description binding site for Di-peptide HEM C 502 and CYS C 171
source : AJ6


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