eF-site ID 5yq7-5
PDB Code 5yq7
Chain 5

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence 5:  PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain 5
residue 23
type
sequence A
description binding site for residue BCL 6 101
source : AD5

2) chain 5
residue 27
type
sequence H
description binding site for residue BCL 6 101
source : AD5

3) chain 5
residue 8
type
sequence F
description binding site for residue BCL 6 102
source : AD6

4) chain 5
residue 13
type
sequence V
description binding site for residue BCL 5 102
source : AH9

5) chain 5
residue 16
type
sequence T
description binding site for residue BCL 5 102
source : AH9

6) chain 5
residue 20
type
sequence L
description binding site for residue BCL 5 102
source : AH9

7) chain 5
residue 27
type
sequence H
description binding site for residue BCL 5 102
source : AH9

8) chain 5
residue 38
type
sequence W
description binding site for residue BCL 5 102
source : AH9

9) chain 5
residue 16
type
sequence T
description binding site for residue KGD 3 101
source : AI1

10) chain 5
residue 19
type
sequence G
description binding site for residue KGD 3 101
source : AI1

11) chain 5
residue 22
type
sequence M
description binding site for residue KGD 3 101
source : AI1

12) chain 5
residue 6
type
sequence F
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

13) chain 5
residue 16
type
sequence T
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

14) chain 5
residue 19
type
sequence G
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

15) chain 5
residue 22
type
sequence M
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

16) chain 5
residue 23
type
sequence A
description binding site for Di-peptide KGD 5 101 and HIS 5 27
source : AJ2

17) chain 5
residue 24
type
sequence L
description binding site for Di-peptide KGD 5 101 and HIS 5 27
source : AJ2

18) chain 5
residue 25
type
sequence L
description binding site for Di-peptide KGD 5 101 and HIS 5 27
source : AJ2

19) chain 5
residue 26
type
sequence I
description binding site for Di-peptide KGD 5 101 and HIS 5 27
source : AJ2

20) chain 5
residue 28
type
sequence F
description binding site for Di-peptide KGD 5 101 and HIS 5 27
source : AJ2


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