eF-site ID 5yq7-4
PDB Code 5yq7
Chain 4

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence 4:  PDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAW
TPWI
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain 4
residue 39
type
sequence I
description binding site for residue BCL 6 102
source : AD6

2) chain 4
residue 14
type
sequence W
description binding site for residue BCL 4 102
source : AD7

3) chain 4
residue 26
type
sequence H
description binding site for residue BCL 4 102
source : AD7

4) chain 4
residue 29
type
sequence V
description binding site for residue BCL 4 102
source : AD7

5) chain 4
residue 30
type
sequence V
description binding site for residue BCL 4 102
source : AD7

6) chain 4
residue 33
type
sequence I
description binding site for residue BCL 4 102
source : AD7

7) chain 4
residue 34
type
sequence Y
description binding site for residue BCL 4 102
source : AD7

8) chain 4
residue 29
type
sequence V
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

9) chain 4
residue 33
type
sequence I
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

10) chain 4
residue 29
type
sequence V
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

11) chain 4
residue 33
type
sequence I
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

12) chain 4
residue 29
type
sequence V
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

13) chain 4
residue 33
type
sequence I
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

14) chain 4
residue 14
type
sequence W
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

15) chain 4
residue 26
type
sequence H
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

16) chain 4
residue 29
type
sequence V
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

17) chain 4
residue 30
type
sequence V
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

18) chain 4
residue 33
type
sequence I
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

19) chain 4
residue 34
type
sequence Y
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

20) chain 4
residue 36
type
sequence G
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

21) chain 4
residue 40
type
sequence A
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

22) chain 4
residue 43
type
sequence A
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

23) chain 4
residue 44
type
sequence H
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

24) chain 4
residue 47
type
sequence C
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

25) chain 4
residue 53
type
sequence W
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1


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