eF-site ID 5yq7-3
PDB Code 5yq7
Chain 3

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence 3:  PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain 3
residue 24
type
sequence L
description binding site for residue KGD 3 101
source : AI1

2) chain 3
residue 27
type
sequence H
description binding site for residue KGD 3 101
source : AI1

3) chain 3
residue 11
type
sequence S
description binding site for residue BCL 1 101
source : AI2

4) chain 3
residue 15
type
sequence S
description binding site for residue BCL 1 101
source : AI2

5) chain 3
residue 15
type
sequence S
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

6) chain 3
residue 16
type
sequence T
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

7) chain 3
residue 17
type
sequence L
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

8) chain 3
residue 18
type
sequence L
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

9) chain 3
residue 20
type
sequence L
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

10) chain 3
residue 21
type
sequence V
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

11) chain 3
residue 22
type
sequence M
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

12) chain 3
residue 23
type
sequence A
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

13) chain 3
residue 16
type
sequence T
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

14) chain 3
residue 18
type
sequence L
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

15) chain 3
residue 19
type
sequence G
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

16) chain 3
residue 20
type
sequence L
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

17) chain 3
residue 21
type
sequence V
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

18) chain 3
residue 22
type
sequence M
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

19) chain 3
residue 23
type
sequence A
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

20) chain 3
residue 25
type
sequence L
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

21) chain 3
residue 26
type
sequence I
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

22) chain 3
residue 27
type
sequence H
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

23) chain 3
residue 28
type
sequence F
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

24) chain 3
residue 16
type
sequence T
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

25) chain 3
residue 18
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

26) chain 3
residue 19
type
sequence G
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

27) chain 3
residue 22
type
sequence M
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

28) chain 3
residue 23
type
sequence A
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

29) chain 3
residue 24
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

30) chain 3
residue 25
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

31) chain 3
residue 26
type
sequence I
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

32) chain 3
residue 28
type
sequence F
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

33) chain 3
residue 29
type
sequence V
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

34) chain 3
residue 30
type
sequence V
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

35) chain 3
residue 31
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

36) chain 3
residue 23
type
sequence A
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

37) chain 3
residue 24
type
sequence L
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

38) chain 3
residue 27
type
sequence H
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1

39) chain 3
residue 38
type
sequence W
description binding site for residues BCL 4 101 and BCL 3 102
source : AJ1


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