eF-site ID 5yq7-1
PDB Code 5yq7
Chain 1

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence 1:  PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain 1
residue 23
type
sequence A
description binding site for residue BCL 2 101
source : AD8

2) chain 1
residue 26
type
sequence I
description binding site for residue BCL 2 101
source : AD8

3) chain 1
residue 27
type
sequence H
description binding site for residue BCL 2 101
source : AD8

4) chain 1
residue 11
type
sequence S
description binding site for residue BCL 2 102
source : AD9

5) chain 1
residue 20
type
sequence L
description binding site for residue BCL 1 101
source : AI2

6) chain 1
residue 23
type
sequence A
description binding site for residue BCL 1 101
source : AI2

7) chain 1
residue 27
type
sequence H
description binding site for residue BCL 1 101
source : AI2

8) chain 1
residue 38
type
sequence W
description binding site for residue BCL 1 101
source : AI2

9) chain 1
residue 24
type
sequence L
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

10) chain 1
residue 27
type
sequence H
description binding site for Di-peptide KGD 3 103 and GLY 3 19
source : AI7

11) chain 1
residue 20
type
sequence L
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

12) chain 1
residue 21
type
sequence V
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

13) chain 1
residue 22
type
sequence M
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

14) chain 1
residue 23
type
sequence A
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

15) chain 1
residue 25
type
sequence L
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

16) chain 1
residue 26
type
sequence I
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

17) chain 1
residue 27
type
sequence H
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

18) chain 1
residue 28
type
sequence F
description binding site for Di-peptide KGD 3 103 and LEU 1 24
source : AI8

19) chain 1
residue 23
type
sequence A
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

20) chain 1
residue 24
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

21) chain 1
residue 25
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

22) chain 1
residue 26
type
sequence I
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

23) chain 1
residue 28
type
sequence F
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

24) chain 1
residue 29
type
sequence V
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

25) chain 1
residue 30
type
sequence V
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9

26) chain 1
residue 31
type
sequence L
description binding site for Di-peptide KGD 3 103 and HIS 1 27
source : AI9


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