eF-site ID 5yq7-Q
PDB Code 5yq7
Chain Q

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence Q:  PDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAW
TPWI
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain Q
residue 43
type
sequence A
description binding site for residue BCL S 102
source : AF8

2) chain Q
residue 36
type
sequence G
description binding site for residue BCL Q 101
source : AF9

3) chain Q
residue 37
type
sequence L
description binding site for residue BCL Q 101
source : AF9

4) chain Q
residue 44
type
sequence H
description binding site for residue BCL Q 101
source : AF9

5) chain Q
residue 47
type
sequence C
description binding site for residue BCL Q 101
source : AF9

6) chain Q
residue 53
type
sequence W
description binding site for residue BCL Q 101
source : AF9

7) chain Q
residue 29
type
sequence V
description binding site for residue KGD N 101
source : AG5

8) chain Q
residue 53
type
sequence W
description binding site for residue BCL N 103
source : AG7

9) chain Q
residue 14
type
sequence W
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

10) chain Q
residue 26
type
sequence H
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

11) chain Q
residue 27
type
sequence D
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

12) chain Q
residue 28
type
sequence I
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

13) chain Q
residue 29
type
sequence V
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

14) chain Q
residue 31
type
sequence K
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

15) chain Q
residue 32
type
sequence T
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

16) chain Q
residue 33
type
sequence I
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

17) chain Q
residue 34
type
sequence Y
description binding site for Di-peptide BCL Q 102 and VAL Q 30
source : AJ9

18) chain Q
residue 43
type
sequence A
description binding site for residues BCL S 101 and BCL R 102
source : AK2


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