eF-site ID 5yq7-D
PDB Code 5yq7
Chain D

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence D:  PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain D
residue 26
type
sequence I
description binding site for residue BCL E 101
source : AC1

2) chain D
residue 27
type
sequence H
description binding site for residue BCL E 101
source : AC1

3) chain D
residue 36
type
sequence F
description binding site for residue BCL E 101
source : AC1

4) chain D
residue 11
type
sequence S
description binding site for residue BCL E 102
source : AC2

5) chain D
residue 24
type
sequence L
description binding site for residue KGD F 101
source : AH2

6) chain D
residue 27
type
sequence H
description binding site for residue KGD F 101
source : AH2

7) chain D
residue 16
type
sequence T
description binding site for residue BCL D 101
source : AH4

8) chain D
residue 20
type
sequence L
description binding site for residue BCL D 101
source : AH4

9) chain D
residue 27
type
sequence H
description binding site for residue BCL D 101
source : AH4

10) chain D
residue 31
type
sequence L
description binding site for residue BCL D 101
source : AH4

11) chain D
residue 38
type
sequence W
description binding site for residue BCL D 101
source : AH4

12) chain D
residue 6
type
sequence F
description binding site for residue KGD 9 101
source : AH6

13) chain D
residue 18
type
sequence L
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

14) chain D
residue 19
type
sequence G
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

15) chain D
residue 22
type
sequence M
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4


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