eF-site ID 5yq7-A
PDB Code 5yq7
Chain A

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Title Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Classification PHOTOSYNTHESIS
Compound Beta subunit of light-harvesting 1
Source ORGANISM_SCIENTIFIC: Roseiflexus castenholzii;
Sequence A:  PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
Description (1)  Beta subunit of light-harvesting 1, Precursor for L subunits of photosynthetic reaction center, Cytochrome subunit of photosynthetic reaction center, Alpha subunit of light-harvesting 1, Peptide from Precursor for L and M subunits of photosynthetic reaction center, Precursor for M subunits of photosynthetic reaction center


Functional site

1) chain A
residue 23
type
sequence A
description binding site for residue BCL B 101
source : AC3

2) chain A
residue 27
type
sequence H
description binding site for residue BCL B 101
source : AC3

3) chain A
residue 36
type
sequence F
description binding site for residue BCL B 101
source : AC3

4) chain A
residue 8
type
sequence F
description binding site for residue BCL B 102
source : AC4

5) chain A
residue 16
type
sequence T
description binding site for residue BCL A 102
source : AH5

6) chain A
residue 20
type
sequence L
description binding site for residue BCL A 102
source : AH5

7) chain A
residue 23
type
sequence A
description binding site for residue BCL A 102
source : AH5

8) chain A
residue 27
type
sequence H
description binding site for residue BCL A 102
source : AH5

9) chain A
residue 31
type
sequence L
description binding site for residue BCL A 102
source : AH5

10) chain A
residue 36
type
sequence F
description binding site for residue BCL A 102
source : AH5

11) chain A
residue 38
type
sequence W
description binding site for residue BCL A 102
source : AH5

12) chain A
residue 16
type
sequence T
description binding site for residue KGD 9 101
source : AH6

13) chain A
residue 18
type
sequence L
description binding site for residue KGD 9 101
source : AH6

14) chain A
residue 19
type
sequence G
description binding site for residue KGD 9 101
source : AH6

15) chain A
residue 22
type
sequence M
description binding site for residue KGD 9 101
source : AH6

16) chain A
residue 6
type
sequence F
description binding site for residue BCL 9 103
source : AH7

17) chain A
residue 14
type
sequence V
description binding site for residue BCL 9 103
source : AH7

18) chain A
residue 23
type
sequence A
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

19) chain A
residue 24
type
sequence L
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

20) chain A
residue 25
type
sequence L
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

21) chain A
residue 26
type
sequence I
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

22) chain A
residue 28
type
sequence F
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

23) chain A
residue 29
type
sequence V
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

24) chain A
residue 30
type
sequence V
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

25) chain A
residue 31
type
sequence L
description binding site for Di-peptide KGD A 101 and HIS A 27
source : AJ4

26) chain A
residue 21-39
type prosite
sequence VMALLIHFVVLSSGAFNWL
description ANTENNA_COMP_ALPHA Antenna complexes alpha subunits signature. VmALlIHfvvLSSgafNWL
source prosite : PS00968


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