eF-site ID 5yc3-A
PDB Code 5yc3
Chain A

click to enlarge
Title Crystal structure of AL3 PHD finger bound to H3K4me2
Classification TRANSCRIPTION
Compound PHD finger protein ALFIN-LIKE 3
Source (5YC3)
Sequence A:  GPLGSDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCV
KITPARAEHIKQYKCPSCSN
Description


Functional site

1) chain A
residue 7
type
sequence C
description binding site for residue ZN A 101
source : AC1

2) chain A
residue 10
type
sequence C
description binding site for residue ZN A 101
source : AC1

3) chain A
residue 31
type
sequence H
description binding site for residue ZN A 101
source : AC1

4) chain A
residue 34
type
sequence C
description binding site for residue ZN A 101
source : AC1

5) chain A
residue 23
type
sequence C
description binding site for residue ZN A 102
source : AC2

6) chain A
residue 26
type
sequence C
description binding site for residue ZN A 102
source : AC2

7) chain A
residue 50
type
sequence C
description binding site for residue ZN A 102
source : AC2

8) chain A
residue 53
type
sequence C
description binding site for residue ZN A 102
source : AC2

9) chain A
residue 14
type
sequence D
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

10) chain A
residue 17
type
sequence D
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

11) chain A
residue 18
type
sequence E
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

12) chain A
residue 19
type
sequence F
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

13) chain A
residue 20
type
sequence W
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

14) chain A
residue 29
type
sequence W
description binding site for Ligand residues MLY P 4 through GLN P 5 bound to THR P 3
source : AC3

15) chain A
residue 7-53
type prosite
sequence CGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIK
QYKCPSC
description ZF_PHD_1 Zinc finger PHD-type signature. CgaCgdsdgadefw...................................IcCdl..Cekw.FHgkCvkitparaehikq................................YkCpsC
source prosite : PS01359

16) chain A
residue 24
type MOD_RES
sequence D
description N6-methyllysine; alternate => ECO:0000269|PubMed:12581305, ECO:0000269|PubMed:14712277, ECO:0000269|PubMed:15598823, ECO:0000269|PubMed:16258034
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 29
type MOD_RES
sequence W
description N6-methyllysine; alternate => ECO:0000269|PubMed:12581305, ECO:0000269|PubMed:14712277, ECO:0000269|PubMed:15598823, ECO:0000269|PubMed:16258034
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links