eF-site ID 5ya2-ABCD
PDB Code 5ya2
Chain A, B, C, D

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Title Crystal structure of LsrK-HPr complex with ADP
Classification STRUCTURAL PROTEIN
Compound Autoinducer-2 kinase
Source (PTHP_ECOLI)
Sequence A:  SKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHMEFD
LNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVL
YNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRA
TGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYM
LSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL
SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGC
LGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNP
HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGI
DTYTLLEEMASRVPPGSWGVMPIFSDHAAPSFINLSIDPD
KCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFA
GGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGV
GAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDK
B:  SKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHMEFD
LNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVL
YNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRA
TGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYM
LSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL
SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGC
LGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNP
HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGI
DTYTLLEEMASRVPPGSWGVMPIFSDHAAPSFINLSIDPD
KCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFA
GGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGV
GAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDK
C:  MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGK
SASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL
MAELE
D:  MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGK
SASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL
MAELE
Description


Functional site

1) chain A
residue 315
type
sequence G
description binding site for residue ADP A 601
source : AC1

2) chain A
residue 318
type
sequence M
description binding site for residue ADP A 601
source : AC1

3) chain A
residue 319
type
sequence R
description binding site for residue ADP A 601
source : AC1

4) chain A
residue 322
type
sequence R
description binding site for residue ADP A 601
source : AC1

5) chain A
residue 341
type
sequence Y
description binding site for residue ADP A 601
source : AC1

6) chain A
residue 428
type
sequence G
description binding site for residue ADP A 601
source : AC1

7) chain A
residue 432
type
sequence G
description binding site for residue ADP A 601
source : AC1

8) chain A
residue 127
type
sequence H
description binding site for residue HEZ A 602
source : AC2

9) chain A
residue 131
type
sequence F
description binding site for residue HEZ A 602
source : AC2

10) chain A
residue 134
type
sequence E
description binding site for residue HEZ A 602
source : AC2

11) chain A
residue 206
type
sequence A
description binding site for residue HEZ A 602
source : AC2

12) chain A
residue 210
type
sequence M
description binding site for residue HEZ A 602
source : AC2

13) chain A
residue 204
type
sequence K
description binding site for residue PO4 A 603
source : AC3

14) chain B
residue 204
type
sequence K
description binding site for residue PO4 A 603
source : AC3

15) chain A
residue 127
type
sequence H
description binding site for residue PO4 A 604
source : AC4

16) chain C
residue 24
type
sequence K
description binding site for residue PO4 A 604
source : AC4

17) chain A
residue 197
type
sequence D
description binding site for residue PO4 A 605
source : AC5

18) chain A
residue 204
type
sequence K
description binding site for residue PO4 A 605
source : AC5

19) chain B
residue 197
type
sequence D
description binding site for residue PO4 A 605
source : AC5

20) chain B
residue 204
type
sequence K
description binding site for residue PO4 A 605
source : AC5

21) chain B
residue 315
type
sequence G
description binding site for residue ADP B 701
source : AC6

22) chain B
residue 319
type
sequence R
description binding site for residue ADP B 701
source : AC6

23) chain B
residue 322
type
sequence R
description binding site for residue ADP B 701
source : AC6

24) chain B
residue 341
type
sequence Y
description binding site for residue ADP B 701
source : AC6

25) chain B
residue 428
type
sequence G
description binding site for residue ADP B 701
source : AC6

26) chain B
residue 432
type
sequence G
description binding site for residue ADP B 701
source : AC6

27) chain B
residue 127
type
sequence H
description binding site for residue HEZ B 702
source : AC7

28) chain B
residue 134
type
sequence E
description binding site for residue HEZ B 702
source : AC7

29) chain B
residue 206
type
sequence A
description binding site for residue HEZ B 702
source : AC7

30) chain B
residue 210
type
sequence M
description binding site for residue HEZ B 702
source : AC7

31) chain D
residue 23
type
sequence V
description binding site for residue HEZ B 702
source : AC7

32) chain B
residue 127
type
sequence H
description binding site for residue PO4 B 703
source : AC8

33) chain D
residue 24
type
sequence K
description binding site for residue PO4 B 703
source : AC8

34) chain C
residue 38
type
sequence N
description binding site for residue PO4 C 101
source : AC9

35) chain C
residue 40
type
sequence K
description binding site for residue PO4 C 101
source : AC9

36) chain D
residue 38
type
sequence N
description binding site for residue PO4 D 101
source : AD1

37) chain D
residue 40
type
sequence K
description binding site for residue PO4 D 101
source : AD1

38) chain C
residue 13-20
type prosite
sequence GLHTRPAA
description PTS_HPR_HIS PTS HPR domain histidine phosphorylation site signature. GLHTRPAA
source prosite : PS00369

39) chain C
residue 39-54
type prosite
sequence GKSASAKSLFKLQTLG
description PTS_HPR_SER PTS HPR domain serine phosphorylation site signature. GKsASaKSLFKLQtLG
source prosite : PS00589

40) chain C
residue 15
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU00681, ECO:0000269|PubMed:2261470
source Swiss-Prot : SWS_FT_FI1

41) chain D
residue 15
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU00681, ECO:0000269|PubMed:2261470
source Swiss-Prot : SWS_FT_FI1


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