eF-site ID 5ya1-ABCD
PDB Code 5ya1
Chain A, B, C, D

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Title crystal structure of LsrK-HPr complex with ATP
Classification STRUCTURAL PROTEIN
Compound Autoinducer-2 kinase
Source (PTHP_ECOLI)
Sequence A:  SKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHMEFD
LNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVL
YNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRA
TGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYM
LSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL
SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGC
LGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNP
HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGI
DTYTLLEEMASRVPPGSWGVMPIFSYHAAPSFINLSIDPD
KCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFA
GGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGV
GAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDK
B:  SKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHMEFD
LNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVL
YNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRA
TGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYM
LSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL
SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGC
LGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNP
HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGI
DTYTLLEEMASRVPPGSWGVMPIFSYHAAPSFINLSIDPD
KCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFA
GGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGV
GAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDK
C:  MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGK
SASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL
MAELE
D:  MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGK
SASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL
MAELE
Description


Functional site

1) chain A
residue 273
type
sequence G
description binding site for residue ATP A 701
source : AC1

2) chain A
residue 315
type
sequence G
description binding site for residue ATP A 701
source : AC1

3) chain A
residue 318
type
sequence M
description binding site for residue ATP A 701
source : AC1

4) chain A
residue 319
type
sequence R
description binding site for residue ATP A 701
source : AC1

5) chain A
residue 322
type
sequence R
description binding site for residue ATP A 701
source : AC1

6) chain A
residue 341
type
sequence Y
description binding site for residue ATP A 701
source : AC1

7) chain A
residue 428
type
sequence G
description binding site for residue ATP A 701
source : AC1

8) chain A
residue 432
type
sequence G
description binding site for residue ATP A 701
source : AC1

9) chain A
residue 127
type
sequence H
description binding site for residue HEZ A 702
source : AC2

10) chain A
residue 134
type
sequence E
description binding site for residue HEZ A 702
source : AC2

11) chain A
residue 210
type
sequence M
description binding site for residue HEZ A 702
source : AC2

12) chain C
residue 20
type
sequence A
description binding site for residue HEZ A 702
source : AC2

13) chain A
residue 92
type
sequence M
description binding site for residue HEZ A 703
source : AC3

14) chain A
residue 261
type
sequence L
description binding site for residue HEZ A 703
source : AC3

15) chain A
residue 278
type
sequence Q
description binding site for residue HEZ A 703
source : AC3

16) chain A
residue 453
type
sequence K
description binding site for residue HEZ A 703
source : AC3

17) chain A
residue 454
type
sequence E
description binding site for residue HEZ A 703
source : AC3

18) chain A
residue 455
type
sequence A
description binding site for residue HEZ A 703
source : AC3

19) chain A
residue 456
type
sequence T
description binding site for residue HEZ A 703
source : AC3

20) chain A
residue 204
type
sequence K
description binding site for residue PO4 A 704
source : AC4

21) chain A
residue 205
type
sequence P
description binding site for residue PO4 A 704
source : AC4

22) chain B
residue 204
type
sequence K
description binding site for residue PO4 A 704
source : AC4

23) chain B
residue 205
type
sequence P
description binding site for residue PO4 A 704
source : AC4

24) chain A
residue 127
type
sequence H
description binding site for residue PO4 A 705
source : AC5

25) chain C
residue 24
type
sequence K
description binding site for residue PO4 A 705
source : AC5

26) chain C
residue 27
type
sequence K
description binding site for residue PO4 A 705
source : AC5

27) chain A
residue 197
type
sequence D
description binding site for residue PO4 A 706
source : AC6

28) chain A
residue 204
type
sequence K
description binding site for residue PO4 A 706
source : AC6

29) chain B
residue 197
type
sequence D
description binding site for residue PO4 A 706
source : AC6

30) chain B
residue 204
type
sequence K
description binding site for residue PO4 A 706
source : AC6

31) chain A
residue 265
type
sequence R
description binding site for residue PO4 A 707
source : AC7

32) chain A
residue 473
type
sequence S
description binding site for residue PO4 A 707
source : AC7

33) chain A
residue 475
type
sequence A
description binding site for residue PO4 A 707
source : AC7

34) chain A
residue 476
type
sequence E
description binding site for residue PO4 A 707
source : AC7

35) chain B
residue 273
type
sequence G
description binding site for residue ATP B 601
source : AC8

36) chain B
residue 315
type
sequence G
description binding site for residue ATP B 601
source : AC8

37) chain B
residue 318
type
sequence M
description binding site for residue ATP B 601
source : AC8

38) chain B
residue 319
type
sequence R
description binding site for residue ATP B 601
source : AC8

39) chain B
residue 322
type
sequence R
description binding site for residue ATP B 601
source : AC8

40) chain B
residue 341
type
sequence Y
description binding site for residue ATP B 601
source : AC8

41) chain B
residue 428
type
sequence G
description binding site for residue ATP B 601
source : AC8

42) chain B
residue 431
type
sequence K
description binding site for residue ATP B 601
source : AC8

43) chain B
residue 432
type
sequence G
description binding site for residue ATP B 601
source : AC8

44) chain B
residue 127
type
sequence H
description binding site for residue HEZ B 602
source : AC9

45) chain B
residue 134
type
sequence E
description binding site for residue HEZ B 602
source : AC9

46) chain B
residue 206
type
sequence A
description binding site for residue HEZ B 602
source : AC9

47) chain B
residue 210
type
sequence M
description binding site for residue HEZ B 602
source : AC9

48) chain D
residue 20
type
sequence A
description binding site for residue HEZ B 602
source : AC9

49) chain B
residue 454
type
sequence E
description binding site for residue HEZ B 603
source : AD1

50) chain B
residue 455
type
sequence A
description binding site for residue HEZ B 603
source : AD1

51) chain B
residue 456
type
sequence T
description binding site for residue HEZ B 603
source : AD1

52) chain B
residue 127
type
sequence H
description binding site for residue PO4 B 604
source : AD2

53) chain D
residue 24
type
sequence K
description binding site for residue PO4 B 604
source : AD2

54) chain B
residue 265
type
sequence R
description binding site for residue PO4 B 605
source : AD3

55) chain B
residue 475
type
sequence A
description binding site for residue PO4 B 605
source : AD3

56) chain B
residue 476
type
sequence E
description binding site for residue PO4 B 605
source : AD3

57) chain C
residue 38
type
sequence N
description binding site for residue PO4 C 101
source : AD4

58) chain C
residue 40
type
sequence K
description binding site for residue PO4 C 101
source : AD4

59) chain D
residue 38
type
sequence N
description binding site for residue PO4 D 101
source : AD5

60) chain D
residue 40
type
sequence K
description binding site for residue PO4 D 101
source : AD5

61) chain C
residue 15
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU00681, ECO:0000269|PubMed:2261470
source Swiss-Prot : SWS_FT_FI1

62) chain D
residue 15
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU00681, ECO:0000269|PubMed:2261470
source Swiss-Prot : SWS_FT_FI1

63) chain C
residue 13-20
type prosite
sequence GLHTRPAA
description PTS_HPR_HIS PTS HPR domain histidine phosphorylation site signature. GLHTRPAA
source prosite : PS00369

64) chain C
residue 39-54
type prosite
sequence GKSASAKSLFKLQTLG
description PTS_HPR_SER PTS HPR domain serine phosphorylation site signature. GKsASaKSLFKLQtLG
source prosite : PS00589


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