eF-site ID 5y87-ABCD PDB Code 5y87 Chain A, B, C, D click to enlarge Title Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme Classification RNA Compound RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3') Source (5Y87) Sequence A:  ACCCGCAAGGCCGACGGC B:  GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGC GCUCAUGGGU C:  ACCCGCAAGGCCGACGGC D:  GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGC GCUCAUGGGU Description Functional site 1) chain A residue 9 type sequence G description binding site for residue MN A 101 source : AC1 2) chain B residue 42 type sequence C description binding site for residue MN B 102 source : AC3 3) chain B residue 43 type sequence U description binding site for residue MN B 102 source : AC3 4) chain B residue 43 type sequence U description binding site for residue MN B 103 source : AC4 5) chain B residue 44 type sequence C description binding site for residue MN B 103 source : AC4 6) chain B residue 47 type sequence G description binding site for residue MN B 104 source : AC5 7) chain B residue 14 type sequence C description binding site for residue MN B 105 source : AC6 8) chain B residue 45 type sequence A description binding site for residue MN B 105 source : AC6 9) chain B residue 41 type sequence G description binding site for residue MN B 106 source : AC7 10) chain B residue 7 type sequence G description binding site for residue MN B 107 source : AC8 11) chain B residue 38 type sequence G description binding site for residue MN B 107 source : AC8 12) chain B residue 17 type sequence G description binding site for residue MN B 108 source : AC9 13) chain B residue 4 type sequence G description binding site for residue MN B 111 source : AD3 14) chain D residue 14 type sequence C description binding site for residue MN B 111 source : AD3 15) chain C residue 9 type sequence G description binding site for residue MN C 101 source : AD4 16) chain D residue 7 type sequence G description binding site for residue MN D 102 source : AD6 17) chain D residue 38 type sequence G description binding site for residue MN D 102 source : AD6 18) chain D residue 41 type sequence G description binding site for residue MN D 103 source : AD7 19) chain D residue 42 type sequence C description binding site for residue MN D 105 source : AD9 20) chain D residue 43 type sequence U description binding site for residue MN D 105 source : AD9 21) chain D residue 43 type sequence U description binding site for residue MN D 106 source : AE1 22) chain D residue 44 type sequence C description binding site for residue MN D 106 source : AE1 23) chain D residue 47 type sequence G description binding site for residue MN D 107 source : AE2 24) chain D residue 17 type sequence G description binding site for residue MN D 108 source : AE3

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