eF-site ID 5y7g-ABCDEFGHIJLN PDB Code 5y7g Chain A, B, C, D, E, F, G, H, I, J, L, N click to enlarge Title Crystal structure of paFAN1 bound to 1nt 5'flap DNA with gap Classification HYDROLASE/DNA Compound Fanconi-associated nuclease 1 homolog Source Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (5Y7G) Sequence A:  ALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAE LPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPL LALGWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANLR KDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDR LRLMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRL RADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWL EGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRA IRSLERGERFAEAHALAREASCAPESDAERQGLARLLPRL QGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREH LEEPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPF HSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRY RDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERL LEDIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQ LRWLQFCREREMPVAVCYVRWH B:  PEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELP EASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLA LGWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANLRKD ALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLR LMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRLRA DVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEG RRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIR SLERGERFAEAHALAREASCAPESDAERQGLARLLPRLQG KLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLE EPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPFHS APADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRD KFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLE DIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLR WLQFCREREMPVAVCYVRWHVDD C:  EPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPE ASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLAL GWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANLRKDA LLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRL MYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRLRAD VDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGR RVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRS LERGERFAEAHALAREASCAPESDAERQGLARLLPRLQGK LGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEE PGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPFHSA PADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDK FGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLED IPGNRAGLPDLIQFWPAQRYRMVEVKGPGDRLQDNQLRWL QFCREREMPVAVCYVRWHVD D:  GTTGGGATTG E:  GAATGTGTGTCTCAATCCCAACTT F:  GTTGGGATTG G:  GAATGTGTGTCTCAATCCCAACTT H:  GTTGGGATTG I:  GAATGTGTGTCTCAATCCCAACTT J:  TGACACACATTCAA L:  TGACACACATTCAA N:  GACACACATTCAA Description Functional site 1) chain A residue 368 type sequence E description binding site for residue CA A 601 source : AC1 2) chain A residue 507 type sequence D description binding site for residue CA A 601 source : AC1 3) chain A residue 522 type sequence E description binding site for residue CA A 601 source : AC1 4) chain A residue 523 type sequence V description binding site for residue CA A 601 source : AC1 5) chain J residue 6 type sequence C description binding site for residue CA A 601 source : AC1 6) chain A residue 386 type sequence E description binding site for residue CA A 602 source : AC2 7) chain A residue 507 type sequence D description binding site for residue CA A 602 source : AC2 8) chain J residue 5 type sequence A description binding site for residue CA A 602 source : AC2 9) chain J residue 6 type sequence C description binding site for residue CA A 602 source : AC2 10) chain B residue 368 type sequence E description binding site for residue CA B 601 source : AC3 11) chain B residue 507 type sequence D description binding site for residue CA B 601 source : AC3 12) chain B residue 522 type sequence E description binding site for residue CA B 601 source : AC3 13) chain B residue 523 type sequence V description binding site for residue CA B 601 source : AC3 14) chain L residue 5 type sequence A description binding site for residue CA B 601 source : AC3 15) chain B residue 368 type sequence E description binding site for residue CA B 602 source : AC4 16) chain B residue 384 type sequence Y description binding site for residue CA B 602 source : AC4 17) chain B residue 386 type sequence E description binding site for residue CA B 602 source : AC4 18) chain B residue 507 type sequence D description binding site for residue CA B 602 source : AC4 19) chain L residue 4 type sequence C description binding site for residue CA B 602 source : AC4 20) chain L residue 5 type sequence A description binding site for residue CA B 602 source : AC4 21) chain C residue 368 type sequence E description binding site for residue CA C 601 source : AC5 22) chain C residue 507 type sequence D description binding site for residue CA C 601 source : AC5 23) chain C residue 522 type sequence E description binding site for residue CA C 601 source : AC5 24) chain C residue 523 type sequence V description binding site for residue CA C 601 source : AC5 25) chain C residue 524 type sequence K description binding site for residue CA C 601 source : AC5 26) chain N residue 6 type sequence C description binding site for residue CA C 601 source : AC5 27) chain A residue 386 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 28) chain C residue 507 type BINDING sequence D description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 29) chain C residue 522 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 30) chain C residue 523 type BINDING sequence V description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 31) chain A residue 507 type BINDING sequence D description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 32) chain A residue 522 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 33) chain A residue 523 type BINDING sequence V description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 34) chain B residue 386 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 35) chain B residue 507 type BINDING sequence D description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 36) chain B residue 522 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 37) chain B residue 523 type BINDING sequence V description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1 38) chain C residue 386 type BINDING sequence E description BINDING => ECO:0000269|PubMed:25319828, ECO:0007744|PDB:4R89 source Swiss-Prot : SWS_FT_FI1

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