eF-site ID 5xlz-D
PDB Code 5xlz
Chain D

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Title The crystal structure of tubulin complexed with a benzylidene derivative of 9(10H)-anthracenone
Classification CELL CYCLE
Compound Tubulin alpha-1B chain
Source ORGANISM_COMMON: Bovine; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence D:  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDS
DLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP
FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLLTVPELT
QQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM
LNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE
AESNMNDLVSEYQQYQDATAD
Description


Functional site

1) chain D
residue 252
type
sequence K
description binding site for residue GTP C 501
source : AC9

2) chain D
residue 10
type
sequence G
description binding site for residue GTP D 501
source : AD3

3) chain D
residue 11
type
sequence Q
description binding site for residue GTP D 501
source : AD3

4) chain D
residue 12
type
sequence C
description binding site for residue GTP D 501
source : AD3

5) chain D
residue 15
type
sequence Q
description binding site for residue GTP D 501
source : AD3

6) chain D
residue 97
type
sequence A
description binding site for residue GTP D 501
source : AD3

7) chain D
residue 98
type
sequence G
description binding site for residue GTP D 501
source : AD3

8) chain D
residue 99
type
sequence N
description binding site for residue GTP D 501
source : AD3

9) chain D
residue 138
type
sequence S
description binding site for residue GTP D 501
source : AD3

10) chain D
residue 141
type
sequence G
description binding site for residue GTP D 501
source : AD3

11) chain D
residue 142
type
sequence G
description binding site for residue GTP D 501
source : AD3

12) chain D
residue 143
type
sequence T
description binding site for residue GTP D 501
source : AD3

13) chain D
residue 144
type
sequence G
description binding site for residue GTP D 501
source : AD3

14) chain D
residue 176
type
sequence S
description binding site for residue GTP D 501
source : AD3

15) chain D
residue 181
type
sequence E
description binding site for residue GTP D 501
source : AD3

16) chain D
residue 204
type
sequence N
description binding site for residue GTP D 501
source : AD3

17) chain D
residue 222
type
sequence Y
description binding site for residue GTP D 501
source : AD3

18) chain D
residue 226
type
sequence N
description binding site for residue GTP D 501
source : AD3

19) chain D
residue 239
type
sequence C
description binding site for residue 89U D 502
source : AD4

20) chain D
residue 240
type
sequence L
description binding site for residue 89U D 502
source : AD4

21) chain D
residue 246
type
sequence L
description binding site for residue 89U D 502
source : AD4

22) chain D
residue 247
type
sequence N
description binding site for residue 89U D 502
source : AD4

23) chain D
residue 249
type
sequence D
description binding site for residue 89U D 502
source : AD4

24) chain D
residue 256
type
sequence N
description binding site for residue 89U D 502
source : AD4

25) chain D
residue 313
type
sequence V
description binding site for residue 89U D 502
source : AD4

26) chain D
residue 315
type
sequence A
description binding site for residue 89U D 502
source : AD4

27) chain D
residue 316
type
sequence I
description binding site for residue 89U D 502
source : AD4

28) chain D
residue 348
type
sequence N
description binding site for residue 89U D 502
source : AD4

29) chain D
residue 350
type
sequence K
description binding site for residue 89U D 502
source : AD4

30) chain D
residue 352
type
sequence A
description binding site for residue 89U D 502
source : AD4

31) chain D
residue 11
type
sequence Q
description binding site for residue MG D 503
source : AD5

32) chain D
residue 58
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI10

33) chain D
residue 324
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI11

34) chain D
residue 142
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

35) chain D
residue 143
type MOD_RES
sequence T
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

36) chain D
residue 144
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

37) chain D
residue 204
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

38) chain D
residue 226
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

39) chain D
residue 11
type MOD_RES
sequence Q
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

40) chain D
residue 138
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

41) chain D
residue 69
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P68363
source Swiss-Prot : SWS_FT_FI2

42) chain D
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI3

43) chain D
residue 55
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q3KRE8
source Swiss-Prot : SWS_FT_FI4

44) chain D
residue 58
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI5

45) chain D
residue 172
type MOD_RES
sequence S
description Phosphoserine; by CDK1 => ECO:0000250|UniProtKB:Q9BVA1
source Swiss-Prot : SWS_FT_FI6

46) chain D
residue 285
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

47) chain D
residue 290
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

48) chain D
residue 318
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI8


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