eF-site ID 5x1b-P
PDB Code 5x1b
Chain P

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Title CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center
Classification OXIDOREDUCTASE
Compound Cytochrome c oxidase subunit 1
Source ORGANISM_COMMON: Bovine; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence P:  HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTL
LMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYG
MILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIH
PLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQA
LFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATG
FHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYW
HFVDVVWLFLYVSIYWWGS
Description (1)  Cytochrome c oxidase subunit 1 (E.C.1.9.3.1), Cytochrome c oxidase subunit 2, Cytochrome c oxidase subunit 3, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, Cytochrome c oxidase subunit 5A, mitochondrial, Cytochrome c oxidase subunit 5B, mitochondrial, Cytochrome c oxidase subunit 6A2, mitochondrial, Cytochrome c oxidase subunit 6B1, Cytochrome c oxidase subunit 6C, Cytochrome c oxidase subunit 7A1, mitochondrial, Cytochrome c oxidase subunit 7B, mitochondrial, Cytochrome c oxidase subunit 7C, mitochondrial, Cytochrome c oxidase subunit 8B, mitochondrial


Functional site

1) chain P
residue 98
type
sequence F
description binding site for residue PEK G 102
source : AF7

2) chain P
residue 240
type
sequence W
description binding site for residue PEK G 102
source : AF7

3) chain P
residue 244
type
sequence F
description binding site for residue PEK G 102
source : AF7

4) chain P
residue 247
type
sequence V
description binding site for residue PEK G 102
source : AF7

5) chain P
residue 251
type
sequence F
description binding site for residue PEK G 102
source : AF7

6) chain P
residue 102
type
sequence Y
description binding site for residue PGV G 103
source : AF8

7) chain P
residue 103
type
sequence H
description binding site for residue PGV G 103
source : AF8

8) chain P
residue 107
type
sequence A
description binding site for residue PGV G 103
source : AF8

9) chain P
residue 9
type
sequence H
description binding site for residue PGV N 608
source : AH4

10) chain P
residue 27
type
sequence M
description binding site for residue PGV N 608
source : AH4

11) chain P
residue 50
type
sequence N
description binding site for residue PGV N 608
source : AH4

12) chain P
residue 57
type
sequence W
description binding site for residue PGV N 608
source : AH4

13) chain P
residue 58
type
sequence W
description binding site for residue PGV N 608
source : AH4

14) chain P
residue 64
type
sequence E
description binding site for residue PGV N 608
source : AH4

15) chain P
residue 71
type
sequence H
description binding site for residue PGV N 608
source : AH4

16) chain P
residue 181
type
sequence Y
description binding site for residue PEK P 302
source : AI2

17) chain P
residue 182
type
sequence Y
description binding site for residue PEK P 302
source : AI2

18) chain P
residue 184
type
sequence A
description binding site for residue PEK P 302
source : AI2

19) chain P
residue 186
type
sequence F
description binding site for residue PEK P 302
source : AI2

20) chain P
residue 187
type
sequence T
description binding site for residue PEK P 302
source : AI2

21) chain P
residue 188
type
sequence I
description binding site for residue PEK P 302
source : AI2

22) chain P
residue 198
type
sequence F
description binding site for residue PEK P 302
source : AI2

23) chain P
residue 202
type
sequence G
description binding site for residue PEK P 302
source : AI2

24) chain P
residue 58
type
sequence W
description binding site for residue PGV P 303
source : AI3

25) chain P
residue 61
type
sequence V
description binding site for residue PGV P 303
source : AI3

26) chain P
residue 65
type
sequence S
description binding site for residue PGV P 303
source : AI3

27) chain P
residue 66
type
sequence T
description binding site for residue PGV P 303
source : AI3

28) chain P
residue 86
type
sequence F
description binding site for residue PGV P 303
source : AI3

29) chain P
residue 207
type
sequence H
description binding site for residue PGV P 303
source : AI3

30) chain P
residue 210
type
sequence I
description binding site for residue PGV P 303
source : AI3

31) chain P
residue 214
type
sequence F
description binding site for residue PGV P 303
source : AI3

32) chain P
residue 221
type
sequence R
description binding site for residue PGV P 303
source : AI3

33) chain P
residue 226
type
sequence H
description binding site for residue PGV P 303
source : AI3

34) chain P
residue 227
type
sequence F
description binding site for residue PGV P 303
source : AI3

35) chain P
residue 231
type
sequence H
description binding site for residue PGV P 303
source : AI3

36) chain P
residue 232
type
sequence H
description binding site for residue PGV P 303
source : AI3

37) chain P
residue 233
type
sequence F
description binding site for residue PGV P 303
source : AI3

38) chain P
residue 234
type
sequence G
description binding site for residue PGV P 303
source : AI3

39) chain P
residue 51
type
sequence M
description binding site for residue CDL P 304
source : AI4

40) chain P
residue 55
type
sequence Y
description binding site for residue CDL P 304
source : AI4

41) chain P
residue 63
type
sequence R
description binding site for residue CDL P 304
source : AI4

42) chain P
residue 67
type
sequence F
description binding site for residue CDL P 304
source : AI4

43) chain P
residue 224
type
sequence K
description binding site for residue CDL P 304
source : AI4

44) chain P
residue 226
type
sequence H
description binding site for residue CDL P 304
source : AI4

45) chain P
residue 156
type
sequence R
description binding site for residue CHD P 305
source : AI5

46) chain P
residue 219
type
sequence F
description binding site for residue CHD P 305
source : AI5

47) chain P
residue 99
type
sequence W
description binding site for residue CHD P 306
source : AI6

48) chain P
residue 103
type
sequence H
description binding site for residue CHD P 306
source : AI6

49) chain P
residue 157
type
sequence K
description binding site for residue PEK T 102
source : AJ1

50) chain P
residue 158
type
sequence H
description binding site for residue PEK T 102
source : AJ1

51) chain P
residue 125
type
sequence N
description binding site for residue CDL T 103
source : AJ2

52) chain P
residue 131
type
sequence L
description binding site for residue CDL T 103
source : AJ2

53) chain P
residue 258
type
sequence W
description binding site for residue CDL T 103
source : AJ2

54) chain P
residue 191-223
type TRANSMEM
sequence GVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQL
description Helical; Name=VI => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI8

55) chain P
residue 233-256
type TRANSMEM
sequence FGFEAAAWYWHFVDVVWLFLYVSI
description Helical; Name=VII => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI9

56) chain P
residue 35-40
type TOPO_DOM
sequence FHFNSM
description Mitochondrial intermembrane => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI3

57) chain P
residue 106-128
type TOPO_DOM
sequence LAPTPELGGCWPPTGIHPLNPLE
description Mitochondrial intermembrane => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI3

58) chain P
residue 184-190
type TOPO_DOM
sequence APFTISD
description Mitochondrial intermembrane => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI3

59) chain P
residue 257-261
type TOPO_DOM
sequence YWWGS
description Mitochondrial intermembrane => ECO:0000269|PubMed:27605664
source Swiss-Prot : SWS_FT_FI3


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