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eF-site ID
|
5x1b-F |
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PDB Code
|
5x1b |
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Chain
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F |
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click to enlarge
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Title
|
CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center |
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Classification
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OXIDOREDUCTASE |
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Compound
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Cytochrome c oxidase subunit 1 |
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Source
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ORGANISM_COMMON: Bovine; ORGANISM_SCIENTIFIC: Bos taurus; |
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Sequence
|
F: |
ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATS
GTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQ
RCPSCGTHYKLVPHQLAH
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Description
|
(1) |
Cytochrome c oxidase subunit 1 (E.C.1.9.3.1), Cytochrome c oxidase subunit 2, Cytochrome c oxidase subunit 3, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, Cytochrome c oxidase subunit 5A, mitochondrial, Cytochrome c oxidase subunit 5B, mitochondrial, Cytochrome c oxidase subunit 6A2, mitochondrial, Cytochrome c oxidase subunit 6B1, Cytochrome c oxidase subunit 6C, Cytochrome c oxidase subunit 7A1, mitochondrial, Cytochrome c oxidase subunit 7B, mitochondrial, Cytochrome c oxidase subunit 7C, mitochondrial, Cytochrome c oxidase subunit 8B, mitochondrial
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Functional site
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|
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1)
|
chain |
F |
| residue |
1 |
| type |
|
| sequence |
A
|
| description |
binding site for residue PEK C 306
|
| source |
: AE6
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2)
|
chain |
F |
| residue |
60 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN F 101
|
| source |
: AF4
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3)
|
chain |
F |
| residue |
62 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN F 101
|
| source |
: AF4
|
|
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4)
|
chain |
F |
| residue |
82 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN F 101
|
| source |
: AF4
|
|
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5)
|
chain |
F |
| residue |
85 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN F 101
|
| source |
: AF4
|
|
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6)
|
chain |
F |
| residue |
37 |
| type |
|
| sequence |
K
|
| description |
binding site for residue EDO F 102
|
| source |
: AF5
|
|
|
7)
|
chain |
F |
| residue |
47 |
| type |
|
| sequence |
N
|
| description |
binding site for residue EDO F 102
|
| source |
: AF5
|
|
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8)
|
chain |
F |
| residue |
48 |
| type |
|
| sequence |
L
|
| description |
binding site for residue EDO F 102
|
| source |
: AF5
|
|
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9)
|
chain |
F |
| residue |
82 |
| type |
TOPO_DOM |
| sequence |
C
|
| description |
Mitochondrial matrix => ECO:0000269|PubMed:27605664
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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10)
|
chain |
F |
| residue |
85 |
| type |
TOPO_DOM |
| sequence |
C
|
| description |
Mitochondrial matrix => ECO:0000269|PubMed:27605664
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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11)
|
chain |
F |
| residue |
90 |
| type |
TRANSMEM |
| sequence |
K
|
| description |
Helical => ECO:0000269|PubMed:27605664
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
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12)
|
chain |
F |
| residue |
69-91 |
| type |
prosite |
| sequence |
VIWFWLHKGEAQRCPSCGTHYKL
|
| description |
COX5B_1 Cytochrome c oxidase subunit Vb, zinc binding region signature. VIWfwlhkgeaqrCpsCGthYKL
|
| source |
prosite : PS00848
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