|
eF-site ID
|
5wxd-A |
PDB Code
|
5wxd |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 1) |
Classification
|
IMMUNE SYSTEM |
Compound
|
HLA class I histocompatibility antigen, A-24 alpha chain |
Source
|
(5WXD) |
|
Sequence
|
A: |
GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDA
ASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRI
ALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDG
KDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYL
EGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
|
|
Description
|
(1) |
HLA class I histocompatibility antigen, A-24 alpha chain, Beta-2-microglobulin, H7-25
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
257-263 |
type |
prosite |
sequence |
YTCHVQH
|
description |
IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
|
source |
prosite : PS00290
|
|
2)
|
chain |
A |
residue |
73 |
type |
MOD_RES |
sequence |
T
|
description |
Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
A |
residue |
84 |
type |
MOD_RES |
sequence |
Y
|
description |
Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
A |
residue |
143 |
type |
MOD_RES |
sequence |
T
|
description |
Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
A |
residue |
146 |
type |
MOD_RES |
sequence |
K
|
description |
Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
A |
residue |
171 |
type |
MOD_RES |
sequence |
Y
|
description |
Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
7)
|
chain |
A |
residue |
159 |
type |
CARBOHYD |
sequence |
Y
|
description |
N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
8)
|
chain |
A |
residue |
86 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
|
|