eF-site ID 5wwp-AB
PDB Code 5wwp
Chain A, B

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Title Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)
Classification HYDROLASE
Compound ORF1ab
Source Human betacoronavirus 2c EMC/2012 (K0BWD0_9BETC)
Sequence A:  PAVGSCVVCHSQTSLRCGTCIRRPFLCCKCCYDHVIATPH
KMVLSVSPYVCNAPGCGVSDVTKLYLGGMSYFCVDHRPVC
SFPLCANGLVFGLYKNMCTGSPSIVEFNRLATCDWTESGD
YTLANTTTEPLKLFAAETLRATEEASKSVATLTAPTIVNQ
ERYVKITGLYPTITVPEEFASHVANFQKSGYSKYVTVQGP
PGTGKSHFAIGLAIYYPTARVVYTACSHAAVDALCEKAFK
YLNIAKCSRIIPAKARVECYDRFKVNETNSQYLFSTINAL
PETSADILVVDEVSMCTNYDLSIINARIKAKHIVYVGDPA
QLPAPRTLLTRGTLEPENFNSVTRLMCNLGPDIFLSMCYR
CPKEIVSTVSALVYNNKLLAKKELSGQCFKILYKGNVTHD
ASSAINRPQLTFVKNFITANPAWSKAVFISPYNSQNAVSR
SMLGLTTQTVDSSQGSEYQYVIFCQTADTAHANNINRFNV
AITRAQKGILCVMTSQALFESLEFTELSFTNYKLQ
B:  PAVGSCVVCHSQTSLRCGTCIRRPFLCCKCCYDHVIATPH
KMVLSVSPYVCNAPGCGVSDVTKLYLGGMSYFCVDHRPVC
SFPLCANGLVFGLYKNMCTGSPSIVEFNRLATCDWTESGD
YTLANTTTEPLKLFAAETLRATEEASKQSYAIATIKEIVG
ERQLLLVWEAGKSKPPLNRNYVFTGYKVQLGEYIFERIDY
SDAVSYKSSTTYKLTVGDIFVLTSHSVATLTAPTIVNQER
YVKITGLYPTITVPEEFASHVANFQKSGYSKYVTVQGPPG
TGKSHFAIGLAIYYPTARVVYTACSHAAVDALCEKAFKYL
NIAKCSRIIPAKARVECYDRFKVNETNSQYLFSTINALPE
TSADILVVDEVSMCTNYDLSIINARIKAKHIVYVGDPAQL
PAPRTLLTRGTLEPENFNSVTRLMCNLGPDIFLSMCYRCP
KEIVSTVSALVYNNKLLAKKELSGQCFKILYKGNVTHDAS
SAINRPQLTFVKNFITANPAWSKAVFISPYNSQNAVSRSM
LGLTTQTVDSSQGSEYQYVIFCQTADTAHANNINRFNVAI
TRAQKGILCVMTSQALFESLEFTELSFTNYK
Description


Functional site

1) chain B
residue 5
type
sequence C
description binding site for residue ZN B 601
source : AC1

2) chain B
residue 8
type
sequence C
description binding site for residue ZN B 601
source : AC1

3) chain B
residue 26
type
sequence C
description binding site for residue ZN B 601
source : AC1

4) chain B
residue 29
type
sequence C
description binding site for residue ZN B 601
source : AC1

5) chain B
residue 16
type
sequence C
description binding site for residue ZN B 602
source : AC2

6) chain B
residue 19
type
sequence C
description binding site for residue ZN B 602
source : AC2

7) chain B
residue 33
type
sequence H
description binding site for residue ZN B 602
source : AC2

8) chain B
residue 39
type
sequence H
description binding site for residue ZN B 602
source : AC2

9) chain B
residue 50
type
sequence C
description binding site for residue ZN B 603
source : AC3

10) chain B
residue 55
type
sequence C
description binding site for residue ZN B 603
source : AC3

11) chain B
residue 72
type
sequence C
description binding site for residue ZN B 603
source : AC3

12) chain B
residue 75
type
sequence H
description binding site for residue ZN B 603
source : AC3

13) chain B
residue 284
type
sequence P
description binding site for residue SO4 B 604
source : AC4

14) chain B
residue 285
type
sequence G
description binding site for residue SO4 B 604
source : AC4

15) chain B
residue 288
type
sequence K
description binding site for residue SO4 B 604
source : AC4

16) chain B
residue 443
type
sequence R
description binding site for residue SO4 B 604
source : AC4

17) chain A
residue 5
type
sequence C
description binding site for residue ZN A 601
source : AC5

18) chain A
residue 8
type
sequence C
description binding site for residue ZN A 601
source : AC5

19) chain A
residue 26
type
sequence C
description binding site for residue ZN A 601
source : AC5

20) chain A
residue 29
type
sequence C
description binding site for residue ZN A 601
source : AC5

21) chain A
residue 16
type
sequence C
description binding site for residue ZN A 602
source : AC6

22) chain A
residue 19
type
sequence C
description binding site for residue ZN A 602
source : AC6

23) chain A
residue 33
type
sequence H
description binding site for residue ZN A 602
source : AC6

24) chain A
residue 50
type
sequence C
description binding site for residue ZN A 603
source : AC7

25) chain A
residue 55
type
sequence C
description binding site for residue ZN A 603
source : AC7

26) chain A
residue 72
type
sequence C
description binding site for residue ZN A 603
source : AC7

27) chain A
residue 75
type
sequence H
description binding site for residue ZN A 603
source : AC7

28) chain A
residue 380
type
sequence T
description binding site for residue SO4 A 604
source : AC8

29) chain A
residue 381
type
sequence N
description binding site for residue SO4 A 604
source : AC8

30) chain A
residue 409
type
sequence R
description binding site for residue SO4 A 604
source : AC8

31) chain A
residue 422
type
sequence F
description binding site for residue SO4 A 604
source : AC8

32) chain A
residue 486
type
sequence S
description binding site for residue SO4 A 605
source : AC9

33) chain A
residue 515
type
sequence Y
description binding site for residue SO4 A 605
source : AC9

34) chain A
residue 516
type
sequence N
description binding site for residue SO4 A 605
source : AC9

35) chain A
residue 285
type
sequence G
description binding site for residue SO4 A 606
source : AD1

36) chain A
residue 286
type
sequence T
description binding site for residue SO4 A 606
source : AD1

37) chain A
residue 287
type
sequence G
description binding site for residue SO4 A 606
source : AD1

38) chain A
residue 288
type
sequence K
description binding site for residue SO4 A 606
source : AD1

39) chain A
residue 284
type
sequence P
description binding site for residue SO4 A 607
source : AD2

40) chain A
residue 285
type
sequence G
description binding site for residue SO4 A 607
source : AD2

41) chain A
residue 404
type
sequence Q
description binding site for residue SO4 A 607
source : AD2

42) chain A
residue 443
type
sequence R
description binding site for residue SO4 A 607
source : AD2

43) chain A
residue 538
type
sequence G
description binding site for residue SO4 A 607
source : AD2

44) chain A
residue 567
type
sequence R
description binding site for residue SO4 A 607
source : AD2


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