eF-site ID 5wtl-ABCD PDB Code 5wtl Chain A, B, C, D click to enlarge Title Crystal structure of the periplasmic portion of outer membrane protein A (OmpA) from Capnocytophaga gingivalis Classification MEMBRANE PROTEIN Compound OmpA family protein Source (C2M2E7_CAPGI) Sequence A:  DTDKDGIPDNKDACPEVPGLKEFNGCPDTDGDGIPDKDDA CPQVKGPKEFNGCPDTDGDGIPDKDDACPEVAGPKEFNGC PDTDGDGIPDKDDKCPDVAGPAENGGCPWPDTDGDGVLDK DDLCPEVAGPASNKGCPEPDEKEQKQLNQYAKTILFDTGK ATIKFQSAEVLNQIINVLKKYPNSRFRIEGHTDSTGKKAK NMILSQNRADAVKVYLIQGGIDAGRLESQGFGPEKPIASN KNKKGRELNRRVEINLIK B:  DTDKDGIPDNKDACPEVPGLKEFNGCPDTDGDGIPDKDDA CPQVKGPKEFNGCPDTDGDGIPDKDDACPEVAGPKEFNGC PDTDGDGIPDKDDKCPDVAGPAENGGCPWPDTDGDGVLDK DDLCPEVAGPASNKGCPEPDEKEQKQLNQYAKTILFDTGK ATIKFQSAEVLNQIINVLKKYPNSRFRIEGHTDSTGKKAK NMILSQNRADAVKVYLIQGGIDAGRLESQGFGPEKPIASN KNKKGRELNRRVEINLIK C:  SKDTDKDGIPDNKDACPEVPGLKEFNGCPDTDGDGIPDKD DACPQVKGPKEFNGCPDTDGDGIPDKDDACPEVAGPKEFN GCPDTDGDGIPDKDDKCPDVAGPAENGGCPWPDTDGDGVL DKDDLCPEVAGPASNKGCPEPDEKEQKQLNQYAKTILFDT GKATIKFQSAEVLNQIINVLKKYPNSRFRIEGHTDSTGKK AKNMILSQNRADAVKVYLIQGGIDAGRLESQGFGPEKPIA SNKNKKGRELNRRVEINLIK D:  DACPEVPGLKEFNGCPDTDGDGIPDKDDACPQVKGPKEFN GCPDTDGDGIPDKDDACPEVAGPKEFNGCPDTDGDGIPDK DDKCPDVAGPAENGGCPWPDTDGDGVLDKDDLCPEVAGPA SNKGCPEPDEKEQKQLNQYAKTILFDTGKATIKFQSAEVL NQIINVLKKYPNSRFRIEGHTDSTGKKAKNMILSQNRADA VKVYLIQGGIDAGRLESQGFGPEKPIASNKNKKGRELNRR VEINLIK Description Functional site 1) chain A residue 198 type sequence D description binding site for residue CA A 1001 source : AC1 2) chain A residue 200 type sequence D description binding site for residue CA A 1001 source : AC1 3) chain A residue 202 type sequence D description binding site for residue CA A 1001 source : AC1 4) chain A residue 204 type sequence I description binding site for residue CA A 1001 source : AC1 5) chain A residue 209 type sequence D description binding site for residue CA A 1001 source : AC1 6) chain A residue 200 type sequence D description binding site for residue CA A 1002 source : AC2 7) chain A residue 202 type sequence D description binding site for residue CA A 1002 source : AC2 8) chain A residue 209 type sequence D description binding site for residue CA A 1002 source : AC2 9) chain A residue 211 type sequence C description binding site for residue CA A 1002 source : AC2 10) chain A residue 214 type sequence V description binding site for residue CA A 1002 source : AC2 11) chain A residue 222 type sequence G description binding site for residue CA A 1002 source : AC2 12) chain A residue 225 type sequence D description binding site for residue CA A 1003 source : AC3 13) chain A residue 227 type sequence D description binding site for residue CA A 1003 source : AC3 14) chain A residue 229 type sequence D description binding site for residue CA A 1003 source : AC3 15) chain A residue 231 type sequence I description binding site for residue CA A 1003 source : AC3 16) chain A residue 236 type sequence D description binding site for residue CA A 1003 source : AC3 17) chain A residue 227 type sequence D description binding site for residue CA A 1004 source : AC4 18) chain A residue 229 type sequence D description binding site for residue CA A 1004 source : AC4 19) chain A residue 236 type sequence D description binding site for residue CA A 1004 source : AC4 20) chain A residue 238 type sequence C description binding site for residue CA A 1004 source : AC4 21) chain A residue 241 type sequence V description binding site for residue CA A 1004 source : AC4 22) chain A residue 249 type sequence G description binding site for residue CA A 1004 source : AC4 23) chain A residue 252 type sequence D description binding site for residue CA A 1005 source : AC5 24) chain A residue 254 type sequence D description binding site for residue CA A 1005 source : AC5 25) chain A residue 256 type sequence D description binding site for residue CA A 1005 source : AC5 26) chain A residue 258 type sequence I description binding site for residue CA A 1005 source : AC5 27) chain A residue 263 type sequence D description binding site for residue CA A 1005 source : AC5 28) chain A residue 254 type sequence D description binding site for residue CA A 1006 source : AC6 29) chain A residue 256 type sequence D description binding site for residue CA A 1006 source : AC6 30) chain A residue 263 type sequence D description binding site for residue CA A 1006 source : AC6 31) chain A residue 265 type sequence C description binding site for residue CA A 1006 source : AC6 32) chain A residue 268 type sequence V description binding site for residue CA A 1006 source : AC6 33) chain A residue 276 type sequence G description binding site for residue CA A 1006 source : AC6 34) chain A residue 279 type sequence D description binding site for residue CA A 1007 source : AC7 35) chain A residue 281 type sequence D description binding site for residue CA A 1007 source : AC7 36) chain A residue 283 type sequence D description binding site for residue CA A 1007 source : AC7 37) chain A residue 285 type sequence I description binding site for residue CA A 1007 source : AC7 38) chain A residue 290 type sequence D description binding site for residue CA A 1007 source : AC7 39) chain A residue 281 type sequence D description binding site for residue CA A 1008 source : AC8 40) chain A residue 283 type sequence D description binding site for residue CA A 1008 source : AC8 41) chain A residue 290 type sequence D description binding site for residue CA A 1008 source : AC8 42) chain A residue 292 type sequence C description binding site for residue CA A 1008 source : AC8 43) chain A residue 295 type sequence V description binding site for residue CA A 1008 source : AC8 44) chain A residue 303 type sequence G description binding site for residue CA A 1008 source : AC8 45) chain A residue 308 type sequence D description binding site for residue CA A 1009 source : AC9 46) chain A residue 310 type sequence D description binding site for residue CA A 1009 source : AC9 47) chain A residue 312 type sequence D description binding site for residue CA A 1009 source : AC9 48) chain A residue 314 type sequence V description binding site for residue CA A 1009 source : AC9 49) chain A residue 319 type sequence D description binding site for residue CA A 1009 source : AC9 50) chain A residue 310 type sequence D description binding site for residue CA A 1010 source : AD1 51) chain A residue 312 type sequence D description binding site for residue CA A 1010 source : AD1 52) chain A residue 319 type sequence D description binding site for residue CA A 1010 source : AD1 53) chain A residue 321 type sequence C description binding site for residue CA A 1010 source : AD1 54) chain A residue 324 type sequence V description binding site for residue CA A 1010 source : AD1 55) chain A residue 332 type sequence G description binding site for residue CA A 1010 source : AD1 56) chain A residue 424 type sequence E description binding site for residue CA A 1011 source : AD2 57) chain A residue 426 type sequence Q description binding site for residue CA A 1011 source : AD2 58) chain B residue 424 type sequence E description binding site for residue CA A 1011 source : AD2 59) chain B residue 426 type sequence Q description binding site for residue CA A 1011 source : AD2 60) chain B residue 198 type sequence D description binding site for residue CA B 1001 source : AD3 61) chain B residue 200 type sequence D description binding site for residue CA B 1001 source : AD3 62) chain B residue 202 type sequence D description binding site for residue CA B 1001 source : AD3 63) chain B residue 204 type sequence I description binding site for residue CA B 1001 source : AD3 64) chain B residue 209 type sequence D description binding site for residue CA B 1001 source : AD3 65) chain B residue 200 type sequence D description binding site for residue CA B 1002 source : AD4 66) chain B residue 202 type sequence D description binding site for residue CA B 1002 source : AD4 67) chain B residue 209 type sequence D description binding site for residue CA B 1002 source : AD4 68) chain B residue 211 type sequence C description binding site for residue CA B 1002 source : AD4 69) chain B residue 214 type sequence V description binding site for residue CA B 1002 source : AD4 70) chain B residue 222 type sequence G description binding site for residue CA B 1002 source : AD4 71) chain B residue 225 type sequence D description binding site for residue CA B 1003 source : AD5 72) chain B residue 227 type sequence D description binding site for residue CA B 1003 source : AD5 73) chain B residue 229 type sequence D description binding site for residue CA B 1003 source : AD5 74) chain B residue 231 type sequence I description binding site for residue CA B 1003 source : AD5 75) chain B residue 236 type sequence D description binding site for residue CA B 1003 source : AD5 76) chain B residue 227 type sequence D description binding site for residue CA B 1004 source : AD6 77) chain B residue 229 type sequence D description binding site for residue CA B 1004 source : AD6 78) chain B residue 236 type sequence D description binding site for residue CA B 1004 source : AD6 79) chain B residue 238 type sequence C description binding site for residue CA B 1004 source : AD6 80) chain B residue 241 type sequence V description binding site for residue CA B 1004 source : AD6 81) chain B residue 249 type sequence G description binding site for residue CA B 1004 source : AD6 82) chain B residue 252 type sequence D description binding site for residue CA B 1005 source : AD7 83) chain B residue 254 type sequence D description binding site for residue CA B 1005 source : AD7 84) chain B residue 256 type sequence D description binding site for residue CA B 1005 source : AD7 85) chain B residue 258 type sequence I description binding site for residue CA B 1005 source : AD7 86) chain B residue 263 type sequence D description binding site for residue CA B 1005 source : AD7 87) chain B residue 254 type sequence D description binding site for residue CA B 1006 source : AD8 88) chain B residue 256 type sequence D description binding site for residue CA B 1006 source : AD8 89) chain B residue 263 type sequence D description binding site for residue CA B 1006 source : AD8 90) chain B residue 265 type sequence C description binding site for residue CA B 1006 source : AD8 91) chain B residue 268 type sequence V description binding site for residue CA B 1006 source : AD8 92) chain B residue 276 type sequence G description binding site for residue CA B 1006 source : AD8 93) chain B residue 279 type sequence D description binding site for residue CA B 1007 source : AD9 94) chain B residue 281 type sequence D description binding site for residue CA B 1007 source : AD9 95) chain B residue 283 type sequence D description binding site for residue CA B 1007 source : AD9 96) chain B residue 285 type sequence I description binding site for residue CA B 1007 source : AD9 97) chain B residue 290 type sequence D description binding site for residue CA B 1007 source : AD9 98) chain B residue 281 type sequence D description binding site for residue CA B 1008 source : AE1 99) chain B residue 283 type sequence D description binding site for residue CA B 1008 source : AE1 100) chain B residue 290 type sequence D description binding site for residue CA B 1008 source : AE1 101) chain B residue 292 type sequence C description binding site for residue CA B 1008 source : AE1 102) chain B residue 295 type sequence V description binding site for residue CA B 1008 source : AE1 103) chain B residue 303 type sequence G description binding site for residue CA B 1008 source : AE1 104) chain B residue 308 type sequence D description binding site for residue CA B 1009 source : AE2 105) chain B residue 310 type sequence D description binding site for residue CA B 1009 source : AE2 106) chain B residue 312 type sequence D description binding site for residue CA B 1009 source : AE2 107) chain B residue 314 type sequence V description binding site for residue CA B 1009 source : AE2 108) chain B residue 319 type sequence D description binding site for residue CA B 1009 source : AE2 109) chain B residue 310 type sequence D description binding site for residue CA B 1010 source : AE3 110) chain B residue 312 type sequence D description binding site for residue CA B 1010 source : AE3 111) chain B residue 319 type sequence D description binding site for residue CA B 1010 source : AE3 112) chain B residue 321 type sequence C description binding site for residue CA B 1010 source : AE3 113) chain B residue 324 type sequence V description binding site for residue CA B 1010 source : AE3 114) chain B residue 332 type sequence G description binding site for residue CA B 1010 source : AE3 115) chain B residue 355 type sequence T description binding site for residue SO4 B 1011 source : AE4 116) chain B residue 356 type sequence G description binding site for residue SO4 B 1011 source : AE4 117) chain B residue 405 type sequence R description binding site for residue SO4 B 1011 source : AE4 118) chain B residue 447 type sequence R description binding site for residue SO4 B 1011 source : AE4 119) chain C residue 198 type sequence D description binding site for residue CA C 1001 source : AE5 120) chain C residue 200 type sequence D description binding site for residue CA C 1001 source : AE5 121) chain C residue 202 type sequence D description binding site for residue CA C 1001 source : AE5 122) chain C residue 204 type sequence I description binding site for residue CA C 1001 source : AE5 123) chain C residue 209 type sequence D description binding site for residue CA C 1001 source : AE5 124) chain C residue 200 type sequence D description binding site for residue CA C 1002 source : AE6 125) chain C residue 202 type sequence D description binding site for residue CA C 1002 source : AE6 126) chain C residue 209 type sequence D description binding site for residue CA C 1002 source : AE6 127) chain C residue 211 type sequence C description binding site for residue CA C 1002 source : AE6 128) chain C residue 214 type sequence V description binding site for residue CA C 1002 source : AE6 129) chain C residue 222 type sequence G description binding site for residue CA C 1002 source : AE6 130) chain C residue 225 type sequence D description binding site for residue CA C 1003 source : AE7 131) chain C residue 227 type sequence D description binding site for residue CA C 1003 source : AE7 132) chain C residue 229 type sequence D description binding site for residue CA C 1003 source : AE7 133) chain C residue 231 type sequence I description binding site for residue CA C 1003 source : AE7 134) chain C residue 236 type sequence D description binding site for residue CA C 1003 source : AE7 135) chain C residue 227 type sequence D description binding site for residue CA C 1004 source : AE8 136) chain C residue 229 type sequence D description binding site for residue CA C 1004 source : AE8 137) chain C residue 236 type sequence D description binding site for residue CA C 1004 source : AE8 138) chain C residue 238 type sequence C description binding site for residue CA C 1004 source : AE8 139) chain C residue 241 type sequence V description binding site for residue CA C 1004 source : AE8 140) chain C residue 249 type sequence G description binding site for residue CA C 1004 source : AE8 141) chain C residue 252 type sequence D description binding site for residue CA C 1005 source : AE9 142) chain C residue 254 type sequence D description binding site for residue CA C 1005 source : AE9 143) chain C residue 256 type sequence D description binding site for residue CA C 1005 source : AE9 144) chain C residue 258 type sequence I description binding site for residue CA C 1005 source : AE9 145) chain C residue 263 type sequence D description binding site for residue CA C 1005 source : AE9 146) chain C residue 254 type sequence D description binding site for residue CA C 1006 source : AF1 147) chain C residue 256 type sequence D description binding site for residue CA C 1006 source : AF1 148) chain C residue 263 type sequence D description binding site for residue CA C 1006 source : AF1 149) chain C residue 265 type sequence C description binding site for residue CA C 1006 source : AF1 150) chain C residue 268 type sequence V description binding site for residue CA C 1006 source : AF1 151) chain C residue 276 type sequence G description binding site for residue CA C 1006 source : AF1 152) chain C residue 279 type sequence D description binding site for residue CA C 1007 source : AF2 153) chain C residue 281 type sequence D description binding site for residue CA C 1007 source : AF2 154) chain C residue 283 type sequence D description binding site for residue CA C 1007 source : AF2 155) chain C residue 285 type sequence I description binding site for residue CA C 1007 source : AF2 156) chain C residue 290 type sequence D description binding site for residue CA C 1007 source : AF2 157) chain C residue 281 type sequence D description binding site for residue CA C 1008 source : AF3 158) chain C residue 283 type sequence D description binding site for residue CA C 1008 source : AF3 159) chain C residue 290 type sequence D description binding site for residue CA C 1008 source : AF3 160) chain C residue 292 type sequence C description binding site for residue CA C 1008 source : AF3 161) chain C residue 295 type sequence V description binding site for residue CA C 1008 source : AF3 162) chain C residue 303 type sequence G description binding site for residue CA C 1008 source : AF3 163) chain C residue 308 type sequence D description binding site for residue CA C 1009 source : AF4 164) chain C residue 310 type sequence D description binding site for residue CA C 1009 source : AF4 165) chain C residue 312 type sequence D description binding site for residue CA C 1009 source : AF4 166) chain C residue 314 type sequence V description binding site for residue CA C 1009 source : AF4 167) chain C residue 319 type sequence D description binding site for residue CA C 1009 source : AF4 168) chain C residue 310 type sequence D description binding site for residue CA C 1010 source : AF5 169) chain C residue 312 type sequence D description binding site for residue CA C 1010 source : AF5 170) chain C residue 319 type sequence D description binding site for residue CA C 1010 source : AF5 171) chain C residue 321 type sequence C description binding site for residue CA C 1010 source : AF5 172) chain C residue 324 type sequence V description binding site for residue CA C 1010 source : AF5 173) chain C residue 332 type sequence G description binding site for residue CA C 1010 source : AF5 174) chain C residue 438 type sequence K description binding site for residue MES C 1011 source : AF6 175) chain C residue 439 type sequence N description binding site for residue MES C 1011 source : AF6 176) chain C residue 440 type sequence K description binding site for residue MES C 1011 source : AF6 177) chain C residue 443 type sequence R description binding site for residue MES C 1011 source : AF6 178) chain C residue 355 type sequence T description binding site for residue SO4 C 1012 source : AF7 179) chain C residue 356 type sequence G description binding site for residue SO4 C 1012 source : AF7 180) chain C residue 405 type sequence R description binding site for residue SO4 C 1012 source : AF7 181) chain C residue 447 type sequence R description binding site for residue SO4 C 1012 source : AF7 182) chain C residue 424 type sequence E description binding site for residue CA C 1013 source : AF8 183) chain C residue 426 type sequence Q description binding site for residue CA C 1013 source : AF8 184) chain D residue 424 type sequence E description binding site for residue CA C 1013 source : AF8 185) chain D residue 426 type sequence Q description binding site for residue CA C 1013 source : AF8 186) chain D residue 209 type sequence D description binding site for residue CA D 501 source : AF9 187) chain D residue 211 type sequence C description binding site for residue CA D 501 source : AF9 188) chain D residue 214 type sequence V description binding site for residue CA D 501 source : AF9 189) chain D residue 216 type sequence G description binding site for residue CA D 501 source : AF9 190) chain D residue 222 type sequence G description binding site for residue CA D 501 source : AF9 191) chain D residue 225 type sequence D description binding site for residue CA D 502 source : AG1 192) chain D residue 227 type sequence D description binding site for residue CA D 502 source : AG1 193) chain D residue 229 type sequence D description binding site for residue CA D 502 source : AG1 194) chain D residue 231 type sequence I description binding site for residue CA D 502 source : AG1 195) chain D residue 236 type sequence D description binding site for residue CA D 502 source : AG1 196) chain D residue 227 type sequence D description binding site for residue CA D 503 source : AG2 197) chain D residue 229 type sequence D description binding site for residue CA D 503 source : AG2 198) chain D residue 236 type sequence D description binding site for residue CA D 503 source : AG2 199) chain D residue 238 type sequence C description binding site for residue CA D 503 source : AG2 200) chain D residue 241 type sequence V description binding site for residue CA D 503 source : AG2 201) chain D residue 249 type sequence G description binding site for residue CA D 503 source : AG2 202) chain D residue 252 type sequence D description binding site for residue CA D 504 source : AG3 203) chain D residue 254 type sequence D description binding site for residue CA D 504 source : AG3 204) chain D residue 256 type sequence D description binding site for residue CA D 504 source : AG3 205) chain D residue 258 type sequence I description binding site for residue CA D 504 source : AG3 206) chain D residue 263 type sequence D description binding site for residue CA D 504 source : AG3 207) chain D residue 254 type sequence D description binding site for residue CA D 505 source : AG4 208) chain D residue 256 type sequence D description binding site for residue CA D 505 source : AG4 209) chain D residue 263 type sequence D description binding site for residue CA D 505 source : AG4 210) chain D residue 265 type sequence C description binding site for residue CA D 505 source : AG4 211) chain D residue 268 type sequence V description binding site for residue CA D 505 source : AG4 212) chain D residue 276 type sequence G description binding site for residue CA D 505 source : AG4 213) chain D residue 279 type sequence D description binding site for residue CA D 506 source : AG5 214) chain D residue 281 type sequence D description binding site for residue CA D 506 source : AG5 215) chain D residue 283 type sequence D description binding site for residue CA D 506 source : AG5 216) chain D residue 285 type sequence I description binding site for residue CA D 506 source : AG5 217) chain D residue 290 type sequence D description binding site for residue CA D 506 source : AG5 218) chain D residue 281 type sequence D description binding site for residue CA D 507 source : AG6 219) chain D residue 283 type sequence D description binding site for residue CA D 507 source : AG6 220) chain D residue 290 type sequence D description binding site for residue CA D 507 source : AG6 221) chain D residue 292 type sequence C description binding site for residue CA D 507 source : AG6 222) chain D residue 295 type sequence V description binding site for residue CA D 507 source : AG6 223) chain D residue 303 type sequence G description binding site for residue CA D 507 source : AG6 224) chain D residue 308 type sequence D description binding site for residue CA D 508 source : AG7 225) chain D residue 310 type sequence D description binding site for residue CA D 508 source : AG7 226) chain D residue 312 type sequence D description binding site for residue CA D 508 source : AG7 227) chain D residue 314 type sequence V description binding site for residue CA D 508 source : AG7 228) chain D residue 319 type sequence D description binding site for residue CA D 508 source : AG7 229) chain D residue 310 type sequence D description binding site for residue CA D 509 source : AG8 230) chain D residue 312 type sequence D description binding site for residue CA D 509 source : AG8 231) chain D residue 319 type sequence D description binding site for residue CA D 509 source : AG8 232) chain D residue 321 type sequence C description binding site for residue CA D 509 source : AG8 233) chain D residue 324 type sequence V description binding site for residue CA D 509 source : AG8 234) chain D residue 332 type sequence G description binding site for residue CA D 509 source : AG8 235) chain A residue 308-320 type prosite sequence DTDGDGVLDKDDL description EF_HAND_1 EF-hand calcium-binding domain. DTDGDGVLDkdDL source prosite : PS00018 236) chain A residue 377-384 type prosite sequence KYPNSRFR description RIBOSOMAL_S12 Ribosomal protein S12 signature. KyPNSRfR source prosite : PS00055

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