|
eF-site ID
|
5w66-J |
PDB Code
|
5w66 |
Chain
|
J |
|
click to enlarge
|
|
Title
|
RNA polymerase I Initial Transcribing Complex State 3 |
Classification
|
TRANSCRIPTION |
Compound
|
DNA-directed RNA polymerase I subunit RPA190 |
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
|
Sequence
|
J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNPLEKR
|
|
Description
|
(1) |
DNA-directed RNA polymerase I subunit RPA190, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerases I and III subunit RPAC1, DNA-directed RNA polymerase I subunit RPA14, DNA-directed RNA polymerases I, II, and III subunit RPABC1, DNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerase I subunit RPA43, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerases I and III subunit RPAC2, DNA-directed RNA polymerases I, II, and III subunit RPABC4, DNA-directed RNA polymerase I subunit RPA49, DNA-directed RNA polymerase I subunit RPA34, RNA polymerase I-specific transcription initiation factor RRN6, RNA polymerase I-specific transcription initiation factor RRN7, RNA polymerase I-specific transcription initiation factor RRN11/RNA Complex
|
|
Functional site
|
|
1)
|
chain |
J |
residue |
7 |
type |
|
sequence |
C
|
description |
binding site for residue ZN J 101
|
source |
: AC5
|
|
2)
|
chain |
J |
residue |
10 |
type |
|
sequence |
C
|
description |
binding site for residue ZN J 101
|
source |
: AC5
|
|
3)
|
chain |
J |
residue |
45 |
type |
|
sequence |
C
|
description |
binding site for residue ZN J 101
|
source |
: AC5
|
|
4)
|
chain |
J |
residue |
46 |
type |
|
sequence |
C
|
description |
binding site for residue ZN J 101
|
source |
: AC5
|
|
5)
|
chain |
J |
residue |
2-11 |
type |
prosite |
sequence |
IVPVRCFSCG
|
description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
source |
prosite : PS01112
|
|
6)
|
chain |
J |
residue |
45 |
type |
ZN_FING |
sequence |
C
|
description |
RRN7-type
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
7)
|
chain |
J |
residue |
46 |
type |
ZN_FING |
sequence |
C
|
description |
RRN7-type
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|