eF-site ID 5vyp-X
PDB Code 5vyp
Chain X

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence X:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain X
residue 4
type
sequence K
description binding site for residue PIO X 101
source : AG3

2) chain X
residue 33
type
sequence H
description binding site for residue PIO X 101
source : AG3

3) chain X
residue 35
type
sequence S
description binding site for residue PIO X 101
source : AG3

4) chain X
residue 36
type
sequence K
description binding site for residue PIO X 101
source : AG3

5) chain X
residue 37
type
sequence I
description binding site for residue PIO X 101
source : AG3

6) chain X
residue 38
type
sequence L
description binding site for residue PIO X 101
source : AG3

7) chain X
residue 40
type
sequence R
description binding site for residue PIO X 101
source : AG3

8) chain X
residue 37
type
sequence I
description binding site for residues PIO W 101 and GOL W 102
source : AG5

9) chain X
residue 40
type
sequence R
description binding site for residues PIO W 101 and GOL W 102
source : AG5

10) chain X
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

11) chain X
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

12) chain X
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

13) chain X
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

14) chain X
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

15) chain X
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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