eF-site ID 5vyp-T
PDB Code 5vyp
Chain T

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence T:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain T
residue 37
type
sequence I
description binding site for residue PIO A 101
source : AC1

2) chain T
residue 38
type
sequence L
description binding site for residue PIO B 101
source : AC4

3) chain T
residue 37
type
sequence I
description binding site for residue PIO S 101
source : AE9

4) chain T
residue 40
type
sequence R
description binding site for residue PIO S 101
source : AE9

5) chain T
residue 1
type
sequence K
description binding site for residue PIO T 101
source : AF2

6) chain T
residue 4
type
sequence K
description binding site for residue PIO T 101
source : AF2

7) chain T
residue 33
type
sequence H
description binding site for residue PIO T 101
source : AF2

8) chain T
residue 35
type
sequence S
description binding site for residue PIO T 101
source : AF2

9) chain T
residue 36
type
sequence K
description binding site for residue PIO T 101
source : AF2

10) chain T
residue 37
type
sequence I
description binding site for residue PIO T 101
source : AF2

11) chain T
residue 38
type
sequence L
description binding site for residue PIO T 101
source : AF2

12) chain T
residue 40
type
sequence R
description binding site for residue PIO T 101
source : AF2

13) chain T
residue 15
type
sequence I
description binding site for residue GOL T 102
source : AF3

14) chain T
residue 16
type
sequence T
description binding site for residue GOL T 102
source : AF3

15) chain T
residue 17
type
sequence K
description binding site for residue GOL T 102
source : AF3

16) chain T
residue 36
type
sequence K
description binding site for residue PIO U 101
source : AF4

17) chain T
residue 36
type
sequence K
description binding site for residue PIO V 101
source : AG1

18) chain T
residue 37
type
sequence I
description binding site for residue PIO V 101
source : AG1

19) chain T
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

20) chain T
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

21) chain T
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

22) chain T
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

23) chain T
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

24) chain T
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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