eF-site ID 5vyp-S
PDB Code 5vyp
Chain S

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence S:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain S
residue 36
type
sequence K
description binding site for residue PIO Q 101
source : AE6

2) chain S
residue 36
type
sequence K
description binding site for residue PIO R 101
source : AE7

3) chain S
residue 4
type
sequence K
description binding site for residue PIO S 101
source : AE9

4) chain S
residue 33
type
sequence H
description binding site for residue PIO S 101
source : AE9

5) chain S
residue 35
type
sequence S
description binding site for residue PIO S 101
source : AE9

6) chain S
residue 36
type
sequence K
description binding site for residue PIO S 101
source : AE9

7) chain S
residue 37
type
sequence I
description binding site for residue PIO S 101
source : AE9

8) chain S
residue 38
type
sequence L
description binding site for residue PIO S 101
source : AE9

9) chain S
residue 40
type
sequence R
description binding site for residue PIO S 101
source : AE9

10) chain S
residue 42
type
sequence L
description binding site for residue PIO S 101
source : AE9

11) chain S
residue 13
type
sequence I
description binding site for residue GOL S 102
source : AF1

12) chain S
residue 40
type
sequence R
description binding site for residue PIO T 101
source : AF2

13) chain S
residue 15
type
sequence I
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

14) chain S
residue 36
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

15) chain S
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

16) chain S
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

17) chain S
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

18) chain S
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

19) chain S
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

20) chain S
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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